Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RB1P06400 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RB1P06400 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.34■■□□□ 1.01
RB1P06400 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RB1P06400 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.34■■□□□ 1.01
RB1P06400 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RB1P06400 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.34■■□□□ 1.01
RB1P06400 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.34■■□□□ 1.01
RB1P06400 AL031985.4-201ENST00000642138 673 ntBASIC21.34■■□□□ 1.01
RB1P06400 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.34■■□□□ 1.01
RB1P06400 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.34■■□□□ 1.01
RB1P06400 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
RB1P06400 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RB1P06400 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.34■■□□□ 1.01
RB1P06400 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RB1P06400 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RB1P06400 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.33■■□□□ 1.01
RB1P06400 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RB1P06400 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RB1P06400 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RB1P06400 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RB1P06400 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.33■■□□□ 1.01
RB1P06400 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.33■■□□□ 1.01
RB1P06400 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.33■■□□□ 1.01
RB1P06400 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RB1P06400 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.33■■□□□ 1.01
RB1P06400 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RB1P06400 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RB1P06400 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.33■■□□□ 1
RB1P06400 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RB1P06400 FSCN1P1-201ENST00000568912 1481 ntBASIC21.32■■□□□ 1
RB1P06400 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.32■■□□□ 1
RB1P06400 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RB1P06400 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.32■■□□□ 1
RB1P06400 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.32■■□□□ 1
RB1P06400 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RB1P06400 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.32■■□□□ 1
RB1P06400 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.32■■□□□ 1
RB1P06400 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.32■■□□□ 1
RB1P06400 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RB1P06400 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RB1P06400 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
RB1P06400 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.32■■□□□ 1
RB1P06400 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.32■■□□□ 1
RB1P06400 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RB1P06400 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RB1P06400 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RB1P06400 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RB1P06400 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.32■■□□□ 1
RB1P06400 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RB1P06400 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RB1P06400 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
RB1P06400 LIN28AP1-201ENST00000429574 405 ntBASIC21.31■■□□□ 1
RB1P06400 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.31■■□□□ 1
RB1P06400 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.31■■□□□ 1
RB1P06400 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
RB1P06400 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.31■■□□□ 1
RB1P06400 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.31■■□□□ 1
RB1P06400 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.31■■□□□ 1
RB1P06400 C2orf69P3-201ENST00000565542 1120 ntBASIC21.31■■□□□ 1
RB1P06400 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RB1P06400 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.31■■□□□ 1
RB1P06400 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.31■■□□□ 1
RB1P06400 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RB1P06400 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RB1P06400 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.3■■□□□ 1
RB1P06400 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RB1P06400 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.3■■□□□ 1
RB1P06400 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RB1P06400 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RB1P06400 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RB1P06400 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
RB1P06400 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.3■■□□□ 1
RB1P06400 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.3■■□□□ 1
RB1P06400 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.3■■□□□ 1
RB1P06400 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RB1P06400 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.3■■□□□ 1
RB1P06400 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.3■■□□□ 1
RB1P06400 AC087388.1-201ENST00000571370 1112 ntBASIC21.3■■□□□ 1
RB1P06400 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.3■■□□□ 1
RB1P06400 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RB1P06400 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.3■■□□□ 1
RB1P06400 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RB1P06400 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RB1P06400 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.3■■□□□ 1
RB1P06400 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RB1P06400 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RB1P06400 KRT8P20-201ENST00000423953 1409 ntBASIC21.29■■□□□ 1
RB1P06400 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RB1P06400 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RB1P06400 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms