Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TCRAP04437 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TCRAP04437 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TCRAP04437 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.25■□□□□ 0.03
TCRAP04437 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TCRAP04437 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRAP04437 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRAP04437 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.25■□□□□ 0.03
TCRAP04437 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRAP04437 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRAP04437 AC079140.4-201ENST00000507448 529 ntBASIC15.25■□□□□ 0.03
TCRAP04437 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.25■□□□□ 0.03
TCRAP04437 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.25■□□□□ 0.03
TCRAP04437 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRAP04437 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TCRAP04437 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
TCRAP04437 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRAP04437 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TCRAP04437 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRAP04437 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TCRAP04437 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.24■□□□□ 0.03
TCRAP04437 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.24■□□□□ 0.03
TCRAP04437 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.24■□□□□ 0.03
TCRAP04437 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.24■□□□□ 0.03
TCRAP04437 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.24■□□□□ 0.03
TCRAP04437 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TCRAP04437 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.24■□□□□ 0.03
TCRAP04437 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.24■□□□□ 0.03
TCRAP04437 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.24■□□□□ 0.03
TCRAP04437 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.24■□□□□ 0.03
TCRAP04437 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TCRAP04437 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.24■□□□□ 0.03
TCRAP04437 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
TCRAP04437 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TCRAP04437 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TCRAP04437 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.23■□□□□ 0.03
TCRAP04437 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TCRAP04437 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TCRAP04437 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRAP04437 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRAP04437 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 Z82202.1-201ENST00000623446 1880 ntBASIC15.23■□□□□ 0.03
TCRAP04437 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TCRAP04437 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TCRAP04437 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.23■□□□□ 0.03
TCRAP04437 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRAP04437 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.23■□□□□ 0.03
TCRAP04437 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TCRAP04437 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRAP04437 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.23■□□□□ 0.03
TCRAP04437 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.23■□□□□ 0.03
TCRAP04437 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.23■□□□□ 0.03
TCRAP04437 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.23■□□□□ 0.03
TCRAP04437 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRAP04437 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TCRAP04437 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TCRAP04437 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRAP04437 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TCRAP04437 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRAP04437 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TCRAP04437 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.22■□□□□ 0.03
TCRAP04437 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.22■□□□□ 0.03
TCRAP04437 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TCRAP04437 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms