Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDGFBP01127 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFBP01127 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.32■□□□□ 0.84
PDGFBP01127 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PDGFBP01127 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PDGFBP01127 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFBP01127 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.32■□□□□ 0.84
PDGFBP01127 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.32■□□□□ 0.84
PDGFBP01127 AC097488.1-201ENST00000507834 756 ntBASIC20.32■□□□□ 0.84
PDGFBP01127 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PDGFBP01127 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFBP01127 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.32■□□□□ 0.84
PDGFBP01127 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.32■□□□□ 0.84
PDGFBP01127 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.32■□□□□ 0.84
PDGFBP01127 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFBP01127 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
PDGFBP01127 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFBP01127 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFBP01127 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFBP01127 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFBP01127 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDGFBP01127 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PDGFBP01127 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.31■□□□□ 0.84
PDGFBP01127 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFBP01127 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFBP01127 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.31■□□□□ 0.84
PDGFBP01127 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFBP01127 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFBP01127 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFBP01127 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.31■□□□□ 0.84
PDGFBP01127 TSPY5P-201ENST00000426936 936 ntBASIC20.31■□□□□ 0.84
PDGFBP01127 HCG4P8-203ENST00000443049 980 ntBASIC20.31■□□□□ 0.84
PDGFBP01127 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.31■□□□□ 0.84
PDGFBP01127 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.31■□□□□ 0.84
PDGFBP01127 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFBP01127 AL138966.2-201ENST00000621997 464 ntBASIC20.31■□□□□ 0.84
PDGFBP01127 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.31■□□□□ 0.84
PDGFBP01127 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFBP01127 IER3-202ENST00000376377 1350 ntBASIC20.31■□□□□ 0.84
PDGFBP01127 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFBP01127 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PDGFBP01127 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PDGFBP01127 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
PDGFBP01127 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFBP01127 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PDGFBP01127 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFBP01127 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFBP01127 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.3■□□□□ 0.84
PDGFBP01127 AC092647.4-201ENST00000457211 535 ntBASIC20.3■□□□□ 0.84
PDGFBP01127 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.3■□□□□ 0.84
PDGFBP01127 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFBP01127 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFBP01127 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFBP01127 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PDGFBP01127 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PDGFBP01127 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PDGFBP01127 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PDGFBP01127 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.29■□□□□ 0.84
PDGFBP01127 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.29■□□□□ 0.84
PDGFBP01127 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 FAM207BP-201ENST00000447172 505 ntBASIC20.29■□□□□ 0.84
PDGFBP01127 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.29■□□□□ 0.84
PDGFBP01127 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.29■□□□□ 0.84
PDGFBP01127 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.29■□□□□ 0.84
PDGFBP01127 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.29■□□□□ 0.84
PDGFBP01127 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.29■□□□□ 0.84
PDGFBP01127 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
PDGFBP01127 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.29■□□□□ 0.84
PDGFBP01127 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFBP01127 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.28■□□□□ 0.84
PDGFBP01127 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 HMGA1P5-201ENST00000412453 271 ntBASIC20.28■□□□□ 0.84
PDGFBP01127 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.28■□□□□ 0.84
PDGFBP01127 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.28■□□□□ 0.84
PDGFBP01127 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.28■□□□□ 0.84
PDGFBP01127 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.28■□□□□ 0.84
PDGFBP01127 DGCR10-201ENST00000609839 495 ntBASIC20.28■□□□□ 0.84
PDGFBP01127 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
PDGFBP01127 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDGFBP01127 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDGFBP01127 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFBP01127 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms