Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.6■■□□□ 1.21
GGPS1O95749 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
GGPS1O95749 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GGPS1O95749 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.6■■□□□ 1.21
GGPS1O95749 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GGPS1O95749 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GGPS1O95749 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GGPS1O95749 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.6■■□□□ 1.21
GGPS1O95749 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
GGPS1O95749 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.59■■□□□ 1.21
GGPS1O95749 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GGPS1O95749 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
GGPS1O95749 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GGPS1O95749 RPS2P55-201ENST00000397318 883 ntBASIC22.59■■□□□ 1.21
GGPS1O95749 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.59■■□□□ 1.21
GGPS1O95749 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.59■■□□□ 1.21
GGPS1O95749 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GGPS1O95749 AC107956.1-201ENST00000494359 873 ntBASIC22.59■■□□□ 1.21
GGPS1O95749 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.59■■□□□ 1.21
GGPS1O95749 AC233702.5-201ENST00000584107 538 ntBASIC22.59■■□□□ 1.21
GGPS1O95749 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
GGPS1O95749 AL121829.2-201ENST00000620908 328 ntBASIC22.59■■□□□ 1.21
GGPS1O95749 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GGPS1O95749 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GGPS1O95749 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GGPS1O95749 PTBP1P-201ENST00000554374 1601 ntBASIC22.59■■□□□ 1.21
GGPS1O95749 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GGPS1O95749 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GGPS1O95749 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.58■■□□□ 1.21
GGPS1O95749 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
GGPS1O95749 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GGPS1O95749 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
GGPS1O95749 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GGPS1O95749 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
GGPS1O95749 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GGPS1O95749 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.58■■□□□ 1.21
GGPS1O95749 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GGPS1O95749 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
GGPS1O95749 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.58■■□□□ 1.21
GGPS1O95749 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.58■■□□□ 1.21
GGPS1O95749 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.58■■□□□ 1.21
GGPS1O95749 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.58■■□□□ 1.21
GGPS1O95749 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.58■■□□□ 1.21
GGPS1O95749 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
GGPS1O95749 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
GGPS1O95749 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
GGPS1O95749 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
GGPS1O95749 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
GGPS1O95749 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
GGPS1O95749 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.57■■□□□ 1.2
GGPS1O95749 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.57■■□□□ 1.2
GGPS1O95749 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.57■■□□□ 1.2
GGPS1O95749 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.57■■□□□ 1.2
GGPS1O95749 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.57■■□□□ 1.2
GGPS1O95749 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.57■■□□□ 1.2
GGPS1O95749 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
GGPS1O95749 FP700111.2-201ENST00000619190 1892 ntBASIC22.57■■□□□ 1.2
GGPS1O95749 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
GGPS1O95749 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.57■■□□□ 1.2
GGPS1O95749 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GGPS1O95749 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
GGPS1O95749 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.56■■□□□ 1.2
GGPS1O95749 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.56■■□□□ 1.2
GGPS1O95749 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GGPS1O95749 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GGPS1O95749 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.56■■□□□ 1.2
GGPS1O95749 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GGPS1O95749 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
GGPS1O95749 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.56■■□□□ 1.2
GGPS1O95749 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.56■■□□□ 1.2
GGPS1O95749 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.56■■□□□ 1.2
GGPS1O95749 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.56■■□□□ 1.2
GGPS1O95749 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.56■■□□□ 1.2
GGPS1O95749 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.56■■□□□ 1.2
GGPS1O95749 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
GGPS1O95749 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GGPS1O95749 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
GGPS1O95749 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.55■■□□□ 1.2
GGPS1O95749 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
GGPS1O95749 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GGPS1O95749 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.55■■□□□ 1.2
GGPS1O95749 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GGPS1O95749 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GGPS1O95749 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
GGPS1O95749 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.55■■□□□ 1.2
GGPS1O95749 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.55■■□□□ 1.2
GGPS1O95749 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GGPS1O95749 AC006128.1-201ENST00000624704 1661 ntBASIC22.55■■□□□ 1.2
GGPS1O95749 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.55■■□□□ 1.2
GGPS1O95749 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
GGPS1O95749 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms