Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN3O95197 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RTN3O95197 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN3O95197 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN3O95197 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN3O95197 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RTN3O95197 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN3O95197 AC098590.1-201ENST00000468126 897 ntBASIC21.15■□□□□ 0.98
RTN3O95197 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN3O95197 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN3O95197 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RTN3O95197 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
RTN3O95197 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN3O95197 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN3O95197 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN3O95197 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN3O95197 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN3O95197 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.14■□□□□ 0.98
RTN3O95197 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.14■□□□□ 0.98
RTN3O95197 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.98
RTN3O95197 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTN3O95197 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTN3O95197 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.14■□□□□ 0.98
RTN3O95197 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN3O95197 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN3O95197 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN3O95197 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.14■□□□□ 0.97
RTN3O95197 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.14■□□□□ 0.97
RTN3O95197 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN3O95197 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
RTN3O95197 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.14■□□□□ 0.97
RTN3O95197 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.14■□□□□ 0.97
RTN3O95197 AC069544.1-201ENST00000609399 999 ntBASIC21.14■□□□□ 0.97
RTN3O95197 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN3O95197 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN3O95197 AC007952.6-201ENST00000573168 2673 ntBASIC21.14■□□□□ 0.97
RTN3O95197 AC003957.1-201ENST00000625108 2673 ntBASIC21.14■□□□□ 0.97
RTN3O95197 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN3O95197 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN3O95197 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN3O95197 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RTN3O95197 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RTN3O95197 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
RTN3O95197 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.13■□□□□ 0.97
RTN3O95197 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.13■□□□□ 0.97
RTN3O95197 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTN3O95197 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN3O95197 GCSHP5-201ENST00000443090 522 ntBASIC21.13■□□□□ 0.97
RTN3O95197 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
RTN3O95197 AC142381.4-202ENST00000563973 229 ntBASIC21.13■□□□□ 0.97
RTN3O95197 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RTN3O95197 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.13■□□□□ 0.97
RTN3O95197 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.13■□□□□ 0.97
RTN3O95197 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.13■□□□□ 0.97
RTN3O95197 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN3O95197 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.13■□□□□ 0.97
RTN3O95197 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RTN3O95197 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN3O95197 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RTN3O95197 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RTN3O95197 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN3O95197 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN3O95197 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RTN3O95197 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.12■□□□□ 0.97
RTN3O95197 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN3O95197 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.12■□□□□ 0.97
RTN3O95197 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN3O95197 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RTN3O95197 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN3O95197 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN3O95197 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN3O95197 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RTN3O95197 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RTN3O95197 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RTN3O95197 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 HLA-G-202ENST00000376815 851 ntBASIC21.11■□□□□ 0.97
RTN3O95197 HLA-G-203ENST00000376818 1127 ntBASIC21.11■□□□□ 0.97
RTN3O95197 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
RTN3O95197 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RTN3O95197 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RTN3O95197 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN3O95197 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN3O95197 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms