Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDRT1O95170 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDRT1O95170 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.87■□□□□ 0.45
CDRT1O95170 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.87■□□□□ 0.45
CDRT1O95170 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDRT1O95170 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.87■□□□□ 0.45
CDRT1O95170 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.87■□□□□ 0.45
CDRT1O95170 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.87■□□□□ 0.45
CDRT1O95170 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDRT1O95170 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CDRT1O95170 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
CDRT1O95170 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.87■□□□□ 0.45
CDRT1O95170 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.87■□□□□ 0.45
CDRT1O95170 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDRT1O95170 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.86■□□□□ 0.45
CDRT1O95170 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDRT1O95170 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDRT1O95170 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.86■□□□□ 0.45
CDRT1O95170 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
CDRT1O95170 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.86■□□□□ 0.45
CDRT1O95170 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.86■□□□□ 0.45
CDRT1O95170 AC099791.1-201ENST00000416440 715 ntBASIC17.86■□□□□ 0.45
CDRT1O95170 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.86■□□□□ 0.45
CDRT1O95170 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.86■□□□□ 0.45
CDRT1O95170 AC105233.4-201ENST00000642045 216 ntBASIC17.86■□□□□ 0.45
CDRT1O95170 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.86■□□□□ 0.45
CDRT1O95170 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.86■□□□□ 0.45
CDRT1O95170 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDRT1O95170 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CDRT1O95170 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.85■□□□□ 0.45
CDRT1O95170 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.85■□□□□ 0.45
CDRT1O95170 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
CDRT1O95170 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 TSPY26P-201ENST00000476365 1326 ntBASIC17.85■□□□□ 0.45
CDRT1O95170 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.85■□□□□ 0.45
CDRT1O95170 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.85■□□□□ 0.45
CDRT1O95170 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDRT1O95170 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.84■□□□□ 0.45
CDRT1O95170 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.84■□□□□ 0.45
CDRT1O95170 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDRT1O95170 AC005224.4-201ENST00000583262 1652 ntBASIC17.84■□□□□ 0.45
CDRT1O95170 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.84■□□□□ 0.45
CDRT1O95170 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CDRT1O95170 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CDRT1O95170 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.84■□□□□ 0.45
CDRT1O95170 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.84■□□□□ 0.45
CDRT1O95170 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.84■□□□□ 0.45
CDRT1O95170 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.84■□□□□ 0.45
CDRT1O95170 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.84■□□□□ 0.45
CDRT1O95170 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.84■□□□□ 0.45
CDRT1O95170 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.84■□□□□ 0.45
CDRT1O95170 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.84■□□□□ 0.45
CDRT1O95170 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.84■□□□□ 0.45
CDRT1O95170 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDRT1O95170 AL691432.2-201ENST00000607222 2038 ntBASIC17.84■□□□□ 0.45
CDRT1O95170 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CDRT1O95170 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
CDRT1O95170 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms