Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA3O95167 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA3O95167 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NDUFA3O95167 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA3O95167 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA3O95167 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NDUFA3O95167 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA3O95167 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA3O95167 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA3O95167 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.05■□□□□ 0.16
NDUFA3O95167 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.05■□□□□ 0.16
NDUFA3O95167 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA3O95167 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NDUFA3O95167 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.04■□□□□ 0.16
NDUFA3O95167 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.04■□□□□ 0.16
NDUFA3O95167 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NDUFA3O95167 MIR4758-201ENST00000577688 71 ntBASIC16.04■□□□□ 0.16
NDUFA3O95167 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NDUFA3O95167 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NDUFA3O95167 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA3O95167 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NDUFA3O95167 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NDUFA3O95167 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.03■□□□□ 0.16
NDUFA3O95167 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NDUFA3O95167 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NDUFA3O95167 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NDUFA3O95167 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.03■□□□□ 0.16
NDUFA3O95167 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.03■□□□□ 0.16
NDUFA3O95167 AL109923.1-201ENST00000618799 583 ntBASIC16.03■□□□□ 0.16
NDUFA3O95167 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.03■□□□□ 0.16
NDUFA3O95167 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NDUFA3O95167 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.03■□□□□ 0.16
NDUFA3O95167 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.03■□□□□ 0.16
NDUFA3O95167 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 AC099778.1-201ENST00000568593 1911 ntBASIC16.03■□□□□ 0.16
NDUFA3O95167 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
NDUFA3O95167 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
NDUFA3O95167 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NDUFA3O95167 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NDUFA3O95167 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NDUFA3O95167 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA3O95167 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA3O95167 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA3O95167 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
NDUFA3O95167 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA3O95167 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 BX119927.1-201ENST00000636596 1552 ntBASIC16.02■□□□□ 0.16
NDUFA3O95167 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
NDUFA3O95167 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NDUFA3O95167 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 DUSP5P2-201ENST00000426873 1033 ntBASIC16.02■□□□□ 0.16
NDUFA3O95167 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA3O95167 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA3O95167 AC091874.3-201ENST00000512672 1195 ntBASIC16.02■□□□□ 0.16
NDUFA3O95167 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 AC023632.3-201ENST00000521633 145 ntBASIC16.02■□□□□ 0.16
NDUFA3O95167 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.02■□□□□ 0.16
NDUFA3O95167 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA3O95167 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.02■□□□□ 0.16
NDUFA3O95167 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA3O95167 AC104771.1-201ENST00000603335 964 ntBASIC16.02■□□□□ 0.16
NDUFA3O95167 AL031963.3-201ENST00000606441 850 ntBASIC16.02■□□□□ 0.16
NDUFA3O95167 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms