Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.52■□□□□ 0.4
UPK1BO75841 AL451085.2-201ENST00000605085 799 ntBASIC17.52■□□□□ 0.4
UPK1BO75841 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPK1BO75841 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPK1BO75841 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPK1BO75841 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPK1BO75841 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
UPK1BO75841 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.52■□□□□ 0.39
UPK1BO75841 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPK1BO75841 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPK1BO75841 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
UPK1BO75841 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.51■□□□□ 0.39
UPK1BO75841 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
UPK1BO75841 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UPK1BO75841 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UPK1BO75841 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.51■□□□□ 0.39
UPK1BO75841 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.51■□□□□ 0.39
UPK1BO75841 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.51■□□□□ 0.39
UPK1BO75841 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.51■□□□□ 0.39
UPK1BO75841 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.51■□□□□ 0.39
UPK1BO75841 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.51■□□□□ 0.39
UPK1BO75841 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK1BO75841 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UPK1BO75841 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.5■□□□□ 0.39
UPK1BO75841 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.5■□□□□ 0.39
UPK1BO75841 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.5■□□□□ 0.39
UPK1BO75841 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.5■□□□□ 0.39
UPK1BO75841 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UPK1BO75841 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 AC133637.1-201ENST00000624115 1537 ntBASIC17.5■□□□□ 0.39
UPK1BO75841 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.5■□□□□ 0.39
UPK1BO75841 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK1BO75841 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UPK1BO75841 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UPK1BO75841 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.49■□□□□ 0.39
UPK1BO75841 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
UPK1BO75841 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UPK1BO75841 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.49■□□□□ 0.39
UPK1BO75841 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.49■□□□□ 0.39
UPK1BO75841 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UPK1BO75841 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 AC090164.3-201ENST00000610780 2143 ntBASIC17.49■□□□□ 0.39
UPK1BO75841 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.49■□□□□ 0.39
UPK1BO75841 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.49■□□□□ 0.39
UPK1BO75841 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.49■□□□□ 0.39
UPK1BO75841 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.49■□□□□ 0.39
UPK1BO75841 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1BO75841 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.48■□□□□ 0.39
UPK1BO75841 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1BO75841 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1BO75841 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1BO75841 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1BO75841 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
UPK1BO75841 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms