Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.32■□□□□ 0.2
CLN5O75503 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLN5O75503 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.32■□□□□ 0.2
CLN5O75503 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.32■□□□□ 0.2
CLN5O75503 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.32■□□□□ 0.2
CLN5O75503 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.32■□□□□ 0.2
CLN5O75503 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLN5O75503 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.32■□□□□ 0.2
CLN5O75503 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLN5O75503 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLN5O75503 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLN5O75503 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CLN5O75503 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLN5O75503 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLN5O75503 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.31■□□□□ 0.2
CLN5O75503 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLN5O75503 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CLN5O75503 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.31■□□□□ 0.2
CLN5O75503 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CLN5O75503 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLN5O75503 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.31■□□□□ 0.2
CLN5O75503 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.31■□□□□ 0.2
CLN5O75503 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.31■□□□□ 0.2
CLN5O75503 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLN5O75503 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.31■□□□□ 0.2
CLN5O75503 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.31■□□□□ 0.2
CLN5O75503 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.31■□□□□ 0.2
CLN5O75503 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.31■□□□□ 0.2
CLN5O75503 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.31■□□□□ 0.2
CLN5O75503 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.31■□□□□ 0.2
CLN5O75503 AL136967.2-201ENST00000623968 743 ntBASIC16.31■□□□□ 0.2
CLN5O75503 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLN5O75503 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLN5O75503 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLN5O75503 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.3■□□□□ 0.2
CLN5O75503 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.3■□□□□ 0.2
CLN5O75503 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CLN5O75503 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.3■□□□□ 0.2
CLN5O75503 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLN5O75503 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.3■□□□□ 0.2
CLN5O75503 AC012414.1-201ENST00000556676 535 ntBASIC16.3■□□□□ 0.2
CLN5O75503 AL031432.3-201ENST00000607698 485 ntBASIC16.3■□□□□ 0.2
CLN5O75503 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.3■□□□□ 0.2
CLN5O75503 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLN5O75503 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLN5O75503 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLN5O75503 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
CLN5O75503 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.29■□□□□ 0.2
CLN5O75503 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.29■□□□□ 0.2
CLN5O75503 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.29■□□□□ 0.2
CLN5O75503 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLN5O75503 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.29■□□□□ 0.2
CLN5O75503 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.29■□□□□ 0.2
CLN5O75503 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.29■□□□□ 0.2
CLN5O75503 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.29■□□□□ 0.2
CLN5O75503 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.29■□□□□ 0.2
CLN5O75503 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.29■□□□□ 0.2
CLN5O75503 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.29■□□□□ 0.2
CLN5O75503 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLN5O75503 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLN5O75503 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.29■□□□□ 0.2
CLN5O75503 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLN5O75503 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLN5O75503 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.28■□□□□ 0.2
CLN5O75503 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms