Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.39■□□□□ 0.69
CNOT3O75175 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.39■□□□□ 0.69
CNOT3O75175 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.39■□□□□ 0.69
CNOT3O75175 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CNOT3O75175 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.39■□□□□ 0.69
CNOT3O75175 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.39■□□□□ 0.69
CNOT3O75175 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.39■□□□□ 0.69
CNOT3O75175 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CNOT3O75175 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CNOT3O75175 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 CYP21A1P-202ENST00000354927 1481 ntBASIC19.38■□□□□ 0.69
CNOT3O75175 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.38■□□□□ 0.69
CNOT3O75175 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CNOT3O75175 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CNOT3O75175 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.38■□□□□ 0.69
CNOT3O75175 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.38■□□□□ 0.69
CNOT3O75175 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.38■□□□□ 0.69
CNOT3O75175 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.38■□□□□ 0.69
CNOT3O75175 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CNOT3O75175 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.38■□□□□ 0.69
CNOT3O75175 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.38■□□□□ 0.69
CNOT3O75175 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CNOT3O75175 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.38■□□□□ 0.69
CNOT3O75175 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CNOT3O75175 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT3O75175 LINC01006-201ENST00000333319 2292 ntBASIC19.37■□□□□ 0.69
CNOT3O75175 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT3O75175 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT3O75175 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CNOT3O75175 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.37■□□□□ 0.69
CNOT3O75175 AC116050.2-201ENST00000612102 1779 ntBASIC19.37■□□□□ 0.69
CNOT3O75175 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT3O75175 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.37■□□□□ 0.69
CNOT3O75175 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CNOT3O75175 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT3O75175 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.37■□□□□ 0.69
CNOT3O75175 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.37■□□□□ 0.69
CNOT3O75175 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT3O75175 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT3O75175 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT3O75175 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.37■□□□□ 0.69
CNOT3O75175 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT3O75175 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT3O75175 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.37■□□□□ 0.69
CNOT3O75175 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT3O75175 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.36■□□□□ 0.69
CNOT3O75175 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CNOT3O75175 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 KRT18P68-201ENST00000392293 1000 ntBASIC19.36■□□□□ 0.69
CNOT3O75175 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CNOT3O75175 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.36■□□□□ 0.69
CNOT3O75175 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.36■□□□□ 0.69
CNOT3O75175 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.36■□□□□ 0.69
CNOT3O75175 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.36■□□□□ 0.69
CNOT3O75175 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT3O75175 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT3O75175 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT3O75175 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT3O75175 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT3O75175 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms