Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CPNE3O75131 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE3O75131 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CPNE3O75131 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE3O75131 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 AC005829.2-201ENST00000571422 1056 ntBASIC19.24■□□□□ 0.67
CPNE3O75131 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CPNE3O75131 RN7SL471P-201ENST00000580476 299 ntBASIC19.24■□□□□ 0.67
CPNE3O75131 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE3O75131 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE3O75131 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CPNE3O75131 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE3O75131 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPNE3O75131 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE3O75131 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE3O75131 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE3O75131 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.23■□□□□ 0.67
CPNE3O75131 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE3O75131 AC233263.1-201ENST00000578059 224 ntBASIC19.23■□□□□ 0.67
CPNE3O75131 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE3O75131 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE3O75131 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
CPNE3O75131 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CPNE3O75131 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE3O75131 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.22■□□□□ 0.67
CPNE3O75131 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.22■□□□□ 0.67
CPNE3O75131 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
CPNE3O75131 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE3O75131 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPNE3O75131 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPNE3O75131 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE3O75131 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE3O75131 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CPNE3O75131 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE3O75131 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE3O75131 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE3O75131 AC008550.1-201ENST00000511500 884 ntBASIC19.21■□□□□ 0.67
CPNE3O75131 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE3O75131 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE3O75131 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 AC027702.1-201ENST00000563810 1770 ntBASIC19.21■□□□□ 0.67
CPNE3O75131 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE3O75131 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CPNE3O75131 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE3O75131 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.21■□□□□ 0.67
CPNE3O75131 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE3O75131 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CPNE3O75131 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE3O75131 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPNE3O75131 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.2■□□□□ 0.66
CPNE3O75131 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.2■□□□□ 0.66
CPNE3O75131 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE3O75131 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE3O75131 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms