Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.55■■□□□ 1.2
ACTN4O43707 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.54■■□□□ 1.2
ACTN4O43707 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ACTN4O43707 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ACTN4O43707 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.54■■□□□ 1.2
ACTN4O43707 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.54■■□□□ 1.2
ACTN4O43707 AC007952.6-201ENST00000573168 2673 ntBASIC22.54■■□□□ 1.2
ACTN4O43707 AC003957.1-201ENST00000625108 2673 ntBASIC22.54■■□□□ 1.2
ACTN4O43707 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ACTN4O43707 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
ACTN4O43707 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ACTN4O43707 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ACTN4O43707 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ACTN4O43707 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.54■■□□□ 1.2
ACTN4O43707 MIR5787-201ENST00000611784 55 ntBASIC22.54■■□□□ 1.2
ACTN4O43707 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
ACTN4O43707 AC105020.6-201ENST00000621523 1217 ntBASIC22.54■■□□□ 1.2
ACTN4O43707 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ACTN4O43707 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.54■■□□□ 1.2
ACTN4O43707 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ACTN4O43707 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.54■■□□□ 1.2
ACTN4O43707 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.53■■□□□ 1.2
ACTN4O43707 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 AL158211.5-201ENST00000623583 2518 ntBASIC22.53■■□□□ 1.2
ACTN4O43707 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.53■■□□□ 1.2
ACTN4O43707 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.53■■□□□ 1.2
ACTN4O43707 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.53■■□□□ 1.2
ACTN4O43707 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.53■■□□□ 1.2
ACTN4O43707 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.53■■□□□ 1.2
ACTN4O43707 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ACTN4O43707 TMEM179-206ENST00000616017 1645 ntBASIC22.53■■□□□ 1.2
ACTN4O43707 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.52■■□□□ 1.2
ACTN4O43707 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.52■■□□□ 1.2
ACTN4O43707 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.52■■□□□ 1.2
ACTN4O43707 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ACTN4O43707 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ACTN4O43707 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ACTN4O43707 AC022517.1-201ENST00000592429 346 ntBASIC22.52■■□□□ 1.2
ACTN4O43707 CYP2T3P-201ENST00000601990 817 ntBASIC22.52■■□□□ 1.2
ACTN4O43707 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.52■■□□□ 1.2
ACTN4O43707 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.52■■□□□ 1.2
ACTN4O43707 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.52■■□□□ 1.2
ACTN4O43707 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.52■■□□□ 1.2
ACTN4O43707 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ACTN4O43707 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
ACTN4O43707 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ACTN4O43707 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
ACTN4O43707 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ACTN4O43707 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
ACTN4O43707 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.51■■□□□ 1.19
ACTN4O43707 KRT18P68-201ENST00000392293 1000 ntBASIC22.51■■□□□ 1.19
ACTN4O43707 AL355472.2-201ENST00000422958 438 ntBASIC22.51■■□□□ 1.19
ACTN4O43707 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
ACTN4O43707 AC231657.2-201ENST00000624556 255 ntBASIC22.51■■□□□ 1.19
ACTN4O43707 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ACTN4O43707 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ACTN4O43707 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
ACTN4O43707 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ACTN4O43707 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.5■■□□□ 1.19
ACTN4O43707 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ACTN4O43707 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ACTN4O43707 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ACTN4O43707 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.5■■□□□ 1.19
ACTN4O43707 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ACTN4O43707 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ACTN4O43707 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ACTN4O43707 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.5■■□□□ 1.19
ACTN4O43707 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.5■■□□□ 1.19
ACTN4O43707 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.5■■□□□ 1.19
ACTN4O43707 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.49■■□□□ 1.19
ACTN4O43707 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
ACTN4O43707 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
ACTN4O43707 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
ACTN4O43707 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.49■■□□□ 1.19
ACTN4O43707 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 AC007322.1-201ENST00000426983 750 ntBASIC22.49■■□□□ 1.19
ACTN4O43707 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.49■■□□□ 1.19
ACTN4O43707 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.49■■□□□ 1.19
ACTN4O43707 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.49■■□□□ 1.19
ACTN4O43707 AC092437.1-201ENST00000624794 1048 ntBASIC22.49■■□□□ 1.19
ACTN4O43707 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.49■■□□□ 1.19
ACTN4O43707 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ACTN4O43707 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms