Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC2O43543 AL512625.2-201ENST00000417533 625 ntBASIC17.43■□□□□ 0.38
XRCC2O43543 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
XRCC2O43543 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.43■□□□□ 0.38
XRCC2O43543 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.43■□□□□ 0.38
XRCC2O43543 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC2O43543 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
XRCC2O43543 AC080038.1-201ENST00000611274 1154 ntBASIC17.43■□□□□ 0.38
XRCC2O43543 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
XRCC2O43543 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC2O43543 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC2O43543 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC2O43543 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC2O43543 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.42■□□□□ 0.38
XRCC2O43543 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
XRCC2O43543 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.42■□□□□ 0.38
XRCC2O43543 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.42■□□□□ 0.38
XRCC2O43543 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.42■□□□□ 0.38
XRCC2O43543 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.42■□□□□ 0.38
XRCC2O43543 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.42■□□□□ 0.38
XRCC2O43543 AL589743.5-201ENST00000616611 1050 ntBASIC17.42■□□□□ 0.38
XRCC2O43543 AC092437.1-201ENST00000624794 1048 ntBASIC17.42■□□□□ 0.38
XRCC2O43543 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.42■□□□□ 0.38
XRCC2O43543 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.42■□□□□ 0.38
XRCC2O43543 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XRCC2O43543 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
XRCC2O43543 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 AC010980.2-201ENST00000587099 1412 ntBASIC17.41■□□□□ 0.38
XRCC2O43543 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
XRCC2O43543 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 AC004911.1-201ENST00000416316 871 ntBASIC17.41■□□□□ 0.38
XRCC2O43543 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.41■□□□□ 0.38
XRCC2O43543 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.41■□□□□ 0.38
XRCC2O43543 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.41■□□□□ 0.38
XRCC2O43543 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.41■□□□□ 0.38
XRCC2O43543 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
XRCC2O43543 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.41■□□□□ 0.38
XRCC2O43543 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.41■□□□□ 0.38
XRCC2O43543 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XRCC2O43543 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
XRCC2O43543 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.4■□□□□ 0.38
XRCC2O43543 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.4■□□□□ 0.38
XRCC2O43543 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
XRCC2O43543 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.4■□□□□ 0.38
XRCC2O43543 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
XRCC2O43543 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
XRCC2O43543 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.4■□□□□ 0.38
XRCC2O43543 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.4■□□□□ 0.38
XRCC2O43543 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.4■□□□□ 0.38
XRCC2O43543 IKBKGP1-201ENST00000612193 1073 ntBASIC17.4■□□□□ 0.38
XRCC2O43543 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.4■□□□□ 0.38
XRCC2O43543 AC073111.5-205ENST00000641717 521 ntBASIC17.4■□□□□ 0.38
XRCC2O43543 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.4■□□□□ 0.38
XRCC2O43543 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC2O43543 AIRN-201ENST00000601203 4374 ntBASIC17.4■□□□□ 0.38
XRCC2O43543 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
XRCC2O43543 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
XRCC2O43543 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
XRCC2O43543 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
XRCC2O43543 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.39■□□□□ 0.38
XRCC2O43543 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
XRCC2O43543 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC2O43543 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
XRCC2O43543 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC2O43543 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC2O43543 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.39■□□□□ 0.37
XRCC2O43543 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms