Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH17O14917 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH17O14917 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDH17O14917 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH17O14917 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
PCDH17O14917 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDH17O14917 AC011484.1-201ENST00000377652 1995 ntBASIC19.14■□□□□ 0.65
PCDH17O14917 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH17O14917 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH17O14917 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH17O14917 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH17O14917 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH17O14917 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH17O14917 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH17O14917 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PCDH17O14917 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH17O14917 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH17O14917 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH17O14917 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH17O14917 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH17O14917 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
PCDH17O14917 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH17O14917 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCDH17O14917 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH17O14917 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH17O14917 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
PCDH17O14917 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH17O14917 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH17O14917 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH17O14917 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH17O14917 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH17O14917 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH17O14917 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH17O14917 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH17O14917 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH17O14917 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH17O14917 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH17O14917 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH17O14917 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDH17O14917 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDH17O14917 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDH17O14917 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDH17O14917 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH17O14917 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 AFG3L1P-217ENST00000557444 2447 ntBASIC19.12■□□□□ 0.65
PCDH17O14917 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH17O14917 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDH17O14917 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDH17O14917 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PCDH17O14917 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH17O14917 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.12■□□□□ 0.65
PCDH17O14917 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 ITM2C-210ENST00000620962 501 ntBASIC19.12■□□□□ 0.65
PCDH17O14917 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH17O14917 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH17O14917 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH17O14917 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
PCDH17O14917 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDH17O14917 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
PCDH17O14917 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDH17O14917 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
PCDH17O14917 AC020907.5-201ENST00000624372 1936 ntBASIC19.12■□□□□ 0.65
PCDH17O14917 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDH17O14917 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDH17O14917 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDH17O14917 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH17O14917 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH17O14917 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH17O14917 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PCDH17O14917 UNC93B5-201ENST00000530315 699 ntBASIC19.11■□□□□ 0.65
PCDH17O14917 AC008687.6-201ENST00000596318 630 ntBASIC19.11■□□□□ 0.65
PCDH17O14917 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.11■□□□□ 0.65
PCDH17O14917 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH17O14917 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH17O14917 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
PCDH17O14917 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH17O14917 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH17O14917 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH17O14917 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH17O14917 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH17O14917 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDH17O14917 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH17O14917 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH17O14917 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH17O14917 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDH17O14917 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms