Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.62□□□□□ -0.07
NACAE9PAV3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.62□□□□□ -0.07
NACAE9PAV3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.62□□□□□ -0.07
NACAE9PAV3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.62□□□□□ -0.07
NACAE9PAV3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.62□□□□□ -0.07
NACAE9PAV3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.62□□□□□ -0.07
NACAE9PAV3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NACAE9PAV3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NACAE9PAV3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.61□□□□□ -0.07
NACAE9PAV3 AC020907.5-201ENST00000624372 1936 ntBASIC14.61□□□□□ -0.07
NACAE9PAV3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NACAE9PAV3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NACAE9PAV3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NACAE9PAV3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.61□□□□□ -0.07
NACAE9PAV3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NACAE9PAV3 AC091799.1-201ENST00000422823 811 ntBASIC14.61□□□□□ -0.07
NACAE9PAV3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 AF201337.1-201ENST00000520239 748 ntBASIC14.61□□□□□ -0.07
NACAE9PAV3 AC098934.4-201ENST00000564127 592 ntBASIC14.61□□□□□ -0.07
NACAE9PAV3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.61□□□□□ -0.07
NACAE9PAV3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NACAE9PAV3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
NACAE9PAV3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.6□□□□□ -0.07
NACAE9PAV3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
NACAE9PAV3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.6□□□□□ -0.07
NACAE9PAV3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.6□□□□□ -0.07
NACAE9PAV3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.6□□□□□ -0.07
NACAE9PAV3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.6□□□□□ -0.07
NACAE9PAV3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.6□□□□□ -0.07
NACAE9PAV3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.6□□□□□ -0.07
NACAE9PAV3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.6□□□□□ -0.07
NACAE9PAV3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.6□□□□□ -0.07
NACAE9PAV3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.6□□□□□ -0.07
NACAE9PAV3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
NACAE9PAV3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NACAE9PAV3 NFIC-211ENST00000641145 8399 ntBASIC14.6□□□□□ -0.07
NACAE9PAV3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NACAE9PAV3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NACAE9PAV3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.6□□□□□ -0.07
NACAE9PAV3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NACAE9PAV3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NACAE9PAV3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NACAE9PAV3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NACAE9PAV3 GPX1P1-201ENST00000388829 606 ntBASIC14.59□□□□□ -0.07
NACAE9PAV3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.59□□□□□ -0.07
NACAE9PAV3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
NACAE9PAV3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NACAE9PAV3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.59□□□□□ -0.07
NACAE9PAV3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NACAE9PAV3 AP001160.3-201ENST00000601484 763 ntBASIC14.59□□□□□ -0.07
NACAE9PAV3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.59□□□□□ -0.07
NACAE9PAV3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NACAE9PAV3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NACAE9PAV3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.59□□□□□ -0.07
NACAE9PAV3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NACAE9PAV3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NACAE9PAV3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms