Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
HFM1A2PYH4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
HFM1A2PYH4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
HFM1A2PYH4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.37
HFM1A2PYH4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC29.84■■■□□ 2.37
HFM1A2PYH4 BX119927.1-201ENST00000636596 1552 ntBASIC29.84■■■□□ 2.37
HFM1A2PYH4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
HFM1A2PYH4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC29.84■■■□□ 2.37
HFM1A2PYH4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
HFM1A2PYH4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC29.84■■■□□ 2.37
HFM1A2PYH4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
HFM1A2PYH4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
HFM1A2PYH4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
HFM1A2PYH4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC29.84■■■□□ 2.37
HFM1A2PYH4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
HFM1A2PYH4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC29.84■■■□□ 2.37
HFM1A2PYH4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
HFM1A2PYH4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
HFM1A2PYH4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC29.83■■■□□ 2.37
HFM1A2PYH4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC29.83■■■□□ 2.37
HFM1A2PYH4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
HFM1A2PYH4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
HFM1A2PYH4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC29.83■■■□□ 2.37
HFM1A2PYH4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC29.83■■■□□ 2.37
HFM1A2PYH4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC29.83■■■□□ 2.37
HFM1A2PYH4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
HFM1A2PYH4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
HFM1A2PYH4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
HFM1A2PYH4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
HFM1A2PYH4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC29.82■■■□□ 2.36
HFM1A2PYH4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
HFM1A2PYH4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
HFM1A2PYH4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
HFM1A2PYH4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
HFM1A2PYH4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
HFM1A2PYH4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC29.82■■■□□ 2.36
HFM1A2PYH4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
HFM1A2PYH4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
HFM1A2PYH4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
HFM1A2PYH4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
HFM1A2PYH4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC29.81■■■□□ 2.36
HFM1A2PYH4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC29.81■■■□□ 2.36
HFM1A2PYH4 AL023875.1-201ENST00000640777 796 ntBASIC29.81■■■□□ 2.36
HFM1A2PYH4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
HFM1A2PYH4 FEM1AP1-201ENST00000431297 1995 ntBASIC29.81■■■□□ 2.36
HFM1A2PYH4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
HFM1A2PYH4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
HFM1A2PYH4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC29.81■■■□□ 2.36
HFM1A2PYH4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
HFM1A2PYH4 AL162377.1-201ENST00000618844 1793 ntBASIC29.81■■■□□ 2.36
HFM1A2PYH4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC29.81■■■□□ 2.36
HFM1A2PYH4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
HFM1A2PYH4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC29.81■■■□□ 2.36
HFM1A2PYH4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC29.81■■■□□ 2.36
HFM1A2PYH4 GABARAPL3-202ENST00000624044 1851 ntBASIC29.81■■■□□ 2.36
HFM1A2PYH4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
HFM1A2PYH4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
HFM1A2PYH4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC29.8■■■□□ 2.36
HFM1A2PYH4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC29.8■■■□□ 2.36
HFM1A2PYH4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
HFM1A2PYH4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC29.8■■■□□ 2.36
HFM1A2PYH4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC29.8■■■□□ 2.36
HFM1A2PYH4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
HFM1A2PYH4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
HFM1A2PYH4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
HFM1A2PYH4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
HFM1A2PYH4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
HFM1A2PYH4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
HFM1A2PYH4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
HFM1A2PYH4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
HFM1A2PYH4 KRASP1-201ENST00000407852 552 ntBASIC29.79■■■□□ 2.36
HFM1A2PYH4 UBE2SP1-201ENST00000450587 669 ntBASIC29.79■■■□□ 2.36
HFM1A2PYH4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
HFM1A2PYH4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
HFM1A2PYH4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
HFM1A2PYH4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
HFM1A2PYH4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
HFM1A2PYH4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
HFM1A2PYH4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC29.78■■■□□ 2.36
HFM1A2PYH4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
HFM1A2PYH4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
HFM1A2PYH4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
HFM1A2PYH4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC29.78■■■□□ 2.36
HFM1A2PYH4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
HFM1A2PYH4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC29.78■■■□□ 2.36
HFM1A2PYH4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC29.78■■■□□ 2.36
HFM1A2PYH4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
HFM1A2PYH4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
HFM1A2PYH4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms