Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 AL162412.1-201ENST00000567129 965 ntBASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 AC068338.2-201ENST00000563278 1430 ntBASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.42■□□□□ 0.86
TCRBV7S3A2A0A539 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 AC026271.2-201ENST00000428091 497 ntBASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV7S3A2A0A539 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 KRT18P11-201ENST00000435214 1283 ntBASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 RARRES2P4-201ENST00000514074 484 ntBASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 TREX1-205ENST00000625293 1783 ntBASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TCRBV7S3A2A0A539 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.39■□□□□ 0.86
TCRBV7S3A2A0A539 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.39■□□□□ 0.86
TCRBV7S3A2A0A539 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV7S3A2A0A539 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV7S3A2A0A539 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV7S3A2A0A539 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms