Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC060766.5-201ENST00000590539 871 ntBASIC19.83■□□□□ 0.77
TRBV5-4A0A0C4DH59 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV5-4A0A0C4DH59 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV5-4A0A0C4DH59 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TRBV5-4A0A0C4DH59 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV5-4A0A0C4DH59 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
TRBV5-4A0A0C4DH59 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TRBV5-4A0A0C4DH59 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.83■□□□□ 0.76
TRBV5-4A0A0C4DH59 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV5-4A0A0C4DH59 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRBV5-4A0A0C4DH59 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV5-4A0A0C4DH59 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 AL691432.2-201ENST00000607222 2038 ntBASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 KRT16P6-202ENST00000425692 1426 ntBASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 PNMA6B-201ENST00000538162 1200 ntBASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV5-4A0A0C4DH59 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 AC092368.3-202ENST00000574180 1591 ntBASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV5-4A0A0C4DH59 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms