Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 AC131212.1-201ENST00000613771 668 ntBASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV13-1A0A0B4J241 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 AC096631.2-201ENST00000436136 790 ntBASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV13-1A0A0B4J241 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 AP001330.3-201ENST00000520123 633 ntBASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 AC120498.10-201ENST00000621827 505 ntBASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV13-1A0A0B4J241 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV13-1A0A0B4J241 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV13-1A0A0B4J241 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
TRAV13-1A0A0B4J241 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV13-1A0A0B4J241 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.96□□□□□ -0.18
TRAV13-1A0A0B4J241 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV13-1A0A0B4J241 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.96□□□□□ -0.18
TRAV13-1A0A0B4J241 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRAV13-1A0A0B4J241 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 RASA4CP-201ENST00000424092 1398 ntBASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 AC008406.3-201ENST00000620001 1374 ntBASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-1A0A0B4J241 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms