Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 BX119927.1-201ENST00000636596 1552 ntBASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 AL158211.5-201ENST00000623583 2518 ntBASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 AC013268.1-206ENST00000638368 961 ntBASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 AC112229.1-201ENST00000639295 961 ntBASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV27A0A087WT01 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 KRT18P11-201ENST00000435214 1283 ntBASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV27A0A087WT01 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 KRT18P5-201ENST00000436075 1291 ntBASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 AC007322.4-201ENST00000509611 723 ntBASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 MFSD11-216ENST00000590393 1141 ntBASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV27A0A087WT01 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV27A0A087WT01 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms