Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 AC018737.1-201ENST00000603900 204 ntBASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 AL356052.1-201ENST00000605764 376 ntBASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 RN7SL3-201ENST00000610674 299 ntBASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 AC068205.4-201ENST00000637880 804 ntBASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LINC00346Q8IVM7 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC027313.1-201ENST00000509159 1666 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 TRIM51HP-202ENST00000530412 1823 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 OR51A10P-201ENST00000307165 937 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 RN7SKP76-201ENST00000364419 323 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 TMED5-201ENST00000370280 750 ntTSL 2 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AL139327.1-201ENST00000382988 348 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 RFKP1-201ENST00000400940 428 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 RN7SKP168-201ENST00000410910 300 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 CTSLP8-201ENST00000413075 967 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC010983.1-201ENST00000418387 1028 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 FTH1P5-201ENST00000425761 545 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 UBE2V2P1-201ENST00000434717 398 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AL390026.1-201ENST00000456647 457 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 RN7SL12P-201ENST00000473849 290 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC026774.2-201ENST00000513990 1098 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AP004833.3-201ENST00000531893 322 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC025252.2-201ENST00000537470 502 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 NPIPP1-203ENST00000547107 1071 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC099777.1-201ENST00000603779 1070 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 MIR6872-201ENST00000612981 62 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC130456.6-201ENST00000623745 765 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 AC099667.1-201ENST00000624222 469 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 MFSD8-234ENST00000641503 1082 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 FLJ42393-201ENST00000623801 2270 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 PRNCR1-201ENST00000635449 12727 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms