Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 MIR5705-201ENST00000579870 89 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 MIR4437-201ENST00000581331 60 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 STARD6-204ENST00000584040 660 ntTSL 3 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 BOLA2P1-201ENST00000584794 232 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 ANKRD20A19P-203ENST00000602724 295 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AL357094.1-201ENST00000603845 844 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC016405.2-201ENST00000607393 312 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AL391903.2-201ENST00000614532 247 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AL359742.1-201ENST00000622497 540 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC002094.5-201ENST00000623773 629 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC110769.3-201ENST00000624567 1173 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 METTL15-211ENST00000634762 718 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC090983.1-201ENST00000623426 3897 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AL022163.1-201ENST00000430261 1569 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC091132.4-201ENST00000587960 2262 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AL031123.2-201ENST00000563225 3325 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 RNU1-16P-201ENST00000365477 164 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AC092042.2-201ENST00000417304 331 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 VN1R48P-201ENST00000448149 1036 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 CHIAP1-201ENST00000456220 995 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 RN7SL228P-201ENST00000470060 303 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 RN7SL647P-201ENST00000485429 300 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AC097263.1-201ENST00000496795 606 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AL445187.1-201ENST00000502685 260 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 SUMO2P17-201ENST00000504438 285 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AC093534.1-201ENST00000504977 132 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AP002981.1-201ENST00000517692 975 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AC008677.3-201ENST00000519146 666 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 MTND1P8-201ENST00000571424 950 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 PRR13P3-201ENST00000603578 376 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 RPL21P136-201ENST00000605378 396 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 PART1_3.1-201ENST00000619680 131 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AL451054.1-201ENST00000621770 772 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 MAPK10-290ENST00000641237 2826 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AC036108.4-201ENST00000611654 2516 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 AC096745.2-201ENST00000627783 1914 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 GOT2P1-201ENST00000440922 1309 ntBASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CDK5RAP1Q96SZ6 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms