Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SIRT7-216ENST00000574915 315 ntTSL 220.28■□□□□ 0.841e-7■■□□□ 12
PRPF8Q6P2Q9 SIRT7-213ENST00000573576 465 ntTSL 315.67■□□□□ 0.11e-7■■□□□ 12
PRPF8Q6P2Q9 DGAT1-204ENST00000525371 840 ntTSL 517.94■□□□□ 0.461e-13■■□□□ 12
PRPF8Q6P2Q9 SAT2-204ENST00000570914 765 ntTSL 27.06□□□□□ -1.283e-11■■□□□ 12
PRPF8Q6P2Q9 EFNA1-204ENST00000474413 1083 ntTSL 315.3■□□□□ 0.046e-7■■□□□ 12
PRPF8Q6P2Q9 EFNA1-205ENST00000497282 719 ntTSL 26.68□□□□□ -1.346e-7■■□□□ 12
PRPF8Q6P2Q9 ELMOD3-215ENST00000462396 590 ntTSL 313.16□□□□□ -0.37e-7■■□□□ 12
PRPF8Q6P2Q9 ELMOD3-217ENST00000466467 920 ntTSL 35.45□□□□□ -1.547e-7■■□□□ 12
PRPF8Q6P2Q9 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.625e-7■■□□□ 12
PRPF8Q6P2Q9 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.785e-7■■□□□ 12
PRPF8Q6P2Q9 MYL4-207ENST00000572303 544 ntTSL 39.21□□□□□ -0.935e-7■■□□□ 12
PRPF8Q6P2Q9 MYL4-206ENST00000571981 920 ntTSL 39.17□□□□□ -0.945e-7■■□□□ 12
PRPF8Q6P2Q9 MYL4-201ENST00000354968 907 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.945e-7■■□□□ 12
PRPF8Q6P2Q9 MYL4-205ENST00000570772 582 ntTSL 38.99□□□□□ -0.975e-7■■□□□ 12
PRPF8Q6P2Q9 MYL4-210ENST00000576874 641 ntTSL 38.99□□□□□ -0.975e-7■■□□□ 12
PRPF8Q6P2Q9 MYL4-203ENST00000536623 650 ntTSL 58.41□□□□□ -1.065e-7■■□□□ 12
PRPF8Q6P2Q9 MYL4-209ENST00000573747 640 ntTSL 56.99□□□□□ -1.295e-7■■□□□ 12
PRPF8Q6P2Q9 TMEM63B-206ENST00000525873 807 ntTSL 212.38□□□□□ -0.436e-8■■□□□ 12
PRPF8Q6P2Q9 SLC38A5-201ENST00000413668 741 ntTSL 211.02□□□□□ -0.655e-7■■□□□ 12
PRPF8Q6P2Q9 WAC-212ENST00000448193 506 ntTSL 223.19■■□□□ 1.32e-9■■□□□ 12
PRPF8Q6P2Q9 WAC-217ENST00000526722 585 ntTSL 412.09□□□□□ -0.472e-7■■□□□ 12
PRPF8Q6P2Q9 WAC-218ENST00000528491 507 ntTSL 412.09□□□□□ -0.472e-7■■□□□ 12
PRPF8Q6P2Q9 WAC-220ENST00000532233 543 ntTSL 412.06□□□□□ -0.482e-7■■□□□ 12
PRPF8Q6P2Q9 WAC-219ENST00000530865 468 ntTSL 22.97□□□□□ -1.937e-8■■□□□ 12
PRPF8Q6P2Q9 KTN1-219ENST00000555164 542 ntTSL 4-0.03□□□□□ -2.411e-7■■□□□ 12
PRPF8Q6P2Q9 TBL2-221ENST00000496056 579 ntTSL 222.2■■□□□ 1.149e-10■■□□□ 12
PRPF8Q6P2Q9 TBL2-217ENST00000476136 559 ntTSL 417.64■□□□□ 0.419e-10■■□□□ 12
PRPF8Q6P2Q9 TBL2-210ENST00000452125 576 ntTSL 415.8■□□□□ 0.129e-10■■□□□ 12
PRPF8Q6P2Q9 NPDC1-204ENST00000485589 506 ntTSL 215.4■□□□□ 0.061e-6■■□□□ 12
PRPF8Q6P2Q9 NPDC1-205ENST00000488145 701 ntTSL 215.38■□□□□ 0.051e-6■■□□□ 12
PRPF8Q6P2Q9 TBL2-214ENST00000465279 762 ntTSL 314.55□□□□□ -0.089e-10■■□□□ 12
PRPF8Q6P2Q9 TBL2-216ENST00000469518 583 ntTSL 49.1□□□□□ -0.959e-10■■□□□ 12
PRPF8Q6P2Q9 TBL2-218ENST00000479892 494 ntTSL 46.43□□□□□ -1.389e-10■■□□□ 12
PRPF8Q6P2Q9 PDIA5-206ENST00000485208 499 ntTSL 59.94□□□□□ -0.828e-7■■□□□ 12
PRPF8Q6P2Q9 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.653e-6■■□□□ 12
PRPF8Q6P2Q9 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.063e-6■■□□□ 12
PRPF8Q6P2Q9 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC7.94□□□□□ -1.143e-6■■□□□ 12
PRPF8Q6P2Q9 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC7.82□□□□□ -1.163e-6■■□□□ 12
PRPF8Q6P2Q9 FLII-228ENST00000582626 573 ntTSL 316.2■□□□□ 0.185e-8■■□□□ 12
PRPF8Q6P2Q9 ITGA5-211ENST00000552564 4996 ntTSL 210.79□□□□□ -0.681e-6■■□□□ 12
PRPF8Q6P2Q9 SELENOP-213ENST00000514403 653 ntTSL 21.16□□□□□ -2.227e-9■■□□□ 12
PRPF8Q6P2Q9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.532e-10■■□□□ 12
PRPF8Q6P2Q9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.012e-10■■□□□ 12
PRPF8Q6P2Q9 PHLDA3-203ENST00000485436 661 ntTSL 312.19□□□□□ -0.462e-10■■□□□ 12
PRPF8Q6P2Q9 CTNNA1-226ENST00000521368 544 ntTSL 411.47□□□□□ -0.573e-6■■□□□ 12
PRPF8Q6P2Q9 RFNG-205ENST00000580793 1755 ntTSL 1 (best)14.03□□□□□ -0.167e-10■■□□□ 12
PRPF8Q6P2Q9 AC009041.2-205ENST00000565467 3726 ntTSL 1 (best)16.32■□□□□ 0.22e-6■■□□□ 12
PRPF8Q6P2Q9 AC009041.2-207ENST00000565069 813 ntTSL 316.28■□□□□ 0.22e-6■■□□□ 12
PRPF8Q6P2Q9 AC009041.2-208ENST00000563837 705 ntTSL 216.17■□□□□ 0.182e-6■■□□□ 12
PRPF8Q6P2Q9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.11■□□□□ 0.172e-6■■□□□ 12
PRPF8Q6P2Q9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.71□□□□□ -0.052e-6■■□□□ 12
PRPF8Q6P2Q9 LMF1-215ENST00000570014 882 ntTSL 514.4□□□□□ -0.12e-6■■□□□ 12
PRPF8Q6P2Q9 LMF1-203ENST00000545827 2731 ntTSL 211.93□□□□□ -0.52e-6■■□□□ 12
PRPF8Q6P2Q9 HDLBP-231ENST00000467435 639 ntTSL 29.72□□□□□ -0.855e-21■■□□□ 12
PRPF8Q6P2Q9 NADSYN1-213ENST00000528509 2999 ntTSL 1 (best)11.19□□□□□ -0.622e-6■■□□□ 11.9
PRPF8Q6P2Q9 ELL2-206ENST00000513343 582 ntTSL 318.33■□□□□ 0.539e-8■■□□□ 11.9
PRPF8Q6P2Q9 COQ8B-212ENST00000599643 735 ntTSL 316.36■□□□□ 0.216e-8■■□□□ 11.9
PRPF8Q6P2Q9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.366e-8■■□□□ 11.9
PRPF8Q6P2Q9 COQ8B-209ENST00000595254 867 ntTSL 512.75□□□□□ -0.376e-8■■□□□ 11.9
PRPF8Q6P2Q9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.456e-8■■□□□ 11.9
PRPF8Q6P2Q9 COQ8B-211ENST00000596455 1014 ntTSL 511.07□□□□□ -0.646e-8■■□□□ 11.9
PRPF8Q6P2Q9 SLC13A5-204ENST00000570687 419 ntTSL 33.39□□□□□ -1.875e-8■■□□□ 11.9
PRPF8Q6P2Q9 HHEX-204ENST00000551454 1307 ntTSL 1 (best)17.9■□□□□ 0.461e-7■■□□□ 11.9
PRPF8Q6P2Q9 PPP5C-213ENST00000527623 1215 ntTSL 217.45■□□□□ 0.383e-7■■□□□ 11.9
PRPF8Q6P2Q9 UCKL1-204ENST00000430743 888 ntTSL 311.57□□□□□ -0.562e-12■■□□□ 11.9
PRPF8Q6P2Q9 MAGED1-205ENST00000470461 810 ntTSL 25.22□□□□□ -1.574e-19■■□□□ 11.9
PRPF8Q6P2Q9 PHPT1-203ENST00000462205 619 ntTSL 312.18□□□□□ -0.461e-10■■□□□ 11.9
PRPF8Q6P2Q9 PHPT1-206ENST00000497413 618 ntTSL 211.52□□□□□ -0.571e-10■■□□□ 11.9
PRPF8Q6P2Q9 DOCK2-201ENST00000256935 6097 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.942e-7■■□□□ 11.9
PRPF8Q6P2Q9 DOCK2-216ENST00000524185 5656 ntTSL 1 (best)5.83□□□□□ -1.482e-7■■□□□ 11.9
PRPF8Q6P2Q9 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC5.75□□□□□ -1.492e-7■■□□□ 11.9
PRPF8Q6P2Q9 DCAF8-208ENST00000461888 2277 ntTSL 512.64□□□□□ -0.392e-8■■□□□ 11.9
PRPF8Q6P2Q9 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.522e-8■■□□□ 11.9
PRPF8Q6P2Q9 DCAF8-202ENST00000368073 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.952e-8■■□□□ 11.9
PRPF8Q6P2Q9 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.262e-8■■□□□ 11.9
PRPF8Q6P2Q9 SDCCAG3-209ENST00000468963 686 ntTSL 212.85□□□□□ -0.357e-7■■□□□ 11.9
PRPF8Q6P2Q9 GSE1-210ENST00000495192 618 ntTSL 210.86□□□□□ -0.671e-8■■□□□ 11.9
PRPF8Q6P2Q9 DNMT1-217ENST00000589091 563 ntTSL 312.74□□□□□ -0.374e-8■■□□□ 11.9
PRPF8Q6P2Q9 DNMT1-220ENST00000589351 672 ntTSL 24.79□□□□□ -1.644e-8■■□□□ 11.9
PRPF8Q6P2Q9 PCYT2-208ENST00000571944 366 ntTSL 311.21□□□□□ -0.617e-12■■□□□ 11.9
PRPF8Q6P2Q9 NAA40-207ENST00000542633 559 ntTSL 511.56□□□□□ -0.562e-9■■□□□ 11.9
PRPF8Q6P2Q9 NAA40-209ENST00000544194 929 ntTSL 210.77□□□□□ -0.692e-9■■□□□ 11.9
PRPF8Q6P2Q9 EPC1-210ENST00000495790 7386 ntTSL 54.07□□□□□ -1.761e-6■■□□□ 11.9
PRPF8Q6P2Q9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.23■□□□□ 0.033e-7■■□□□ 11.9
PRPF8Q6P2Q9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.283e-7■■□□□ 11.9
PRPF8Q6P2Q9 HDLBP-237ENST00000479169 1017 ntTSL 29.89□□□□□ -0.831e-11■■□□□ 11.9
PRPF8Q6P2Q9 NCKAP5L-205ENST00000491441 1911 ntTSL 1 (best)13.04□□□□□ -0.323e-6■■□□□ 11.9
PRPF8Q6P2Q9 NCKAP5L-203ENST00000477361 2596 ntTSL 29.39□□□□□ -0.913e-6■■□□□ 11.9
PRPF8Q6P2Q9 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC7.25□□□□□ -1.254e-15■■□□□ 11.9
PRPF8Q6P2Q9 SUZ12P1-205ENST00000582329 785 ntTSL 5-0.51□□□□□ -2.494e-15■■□□□ 11.9
PRPF8Q6P2Q9 LDLR-209ENST00000558528 456 ntTSL 24.06□□□□□ -1.761e-6■■□□□ 11.9
PRPF8Q6P2Q9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC26.64■■□□□ 1.854e-7■■□□□ 11.9
PRPF8Q6P2Q9 CDV3-204ENST00000503932 563 ntTSL 418.46■□□□□ 0.554e-7■■□□□ 11.9
PRPF8Q6P2Q9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.124e-7■■□□□ 11.9
PRPF8Q6P2Q9 LRIG2-203ENST00000466161 3366 ntTSL 24.57□□□□□ -1.682e-6■■□□□ 11.9
PRPF8Q6P2Q9 ERGIC3-214ENST00000482338 598 ntTSL 27.17□□□□□ -1.269e-13■■□□□ 11.9
PRPF8Q6P2Q9 URM1-205ENST00000470840 723 ntTSL 211.05□□□□□ -0.642e-7■■□□□ 11.9
PRPF8Q6P2Q9 URM1-203ENST00000372853 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.062e-7■■□□□ 11.9
PRPF8Q6P2Q9 URM1-204ENST00000452446 2944 ntTSL 2 BASIC7.17□□□□□ -1.262e-7■■□□□ 11.9
PRPF8Q6P2Q9 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC6.59□□□□□ -1.352e-7■■□□□ 11.9
Retrieved 100 of 73,762 protein–RNA pairs in 1036.7 ms