Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 SNORA51.7-201ENST00000384171 134 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 SNORA2C-201ENST00000408564 137 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 RN7SKP225-201ENST00000410405 352 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 SALL1P1-201ENST00000438101 3837 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 SNX18P9-201ENST00000440580 835 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 ARMC8P1-201ENST00000443069 1289 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC012493.1-201ENST00000453252 760 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 PTMAP1-205ENST00000455552 325 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC243312.1-201ENST00000570582 275 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 MIR5705-201ENST00000579870 89 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 PRR13P3-201ENST00000603578 376 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 RPS28P1-201ENST00000604589 187 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AL022238.3-201ENST00000609279 443 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC006335.3-201ENST00000613408 292 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 PART1_3.1-201ENST00000619680 131 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AL391380.1-201ENST00000439300 1432 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 TRIM60P14-201ENST00000513444 1419 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 MAPK10-281ENST00000641170 3070 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 LINC02035-201ENST00000610128 5476 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC106872.6-201ENST00000514228 1346 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC090132.1-201ENST00000524071 1480 ntBASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
C9orf40Q8IXQ3 AC130456.1-201ENST00000565085 1363 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 FOLH1B-202ENST00000529567 2145 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 RN7SKP211-201ENST00000363328 315 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 SSX6-201ENST00000376932 562 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 NHP2P2-201ENST00000396362 460 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 MIR1231-201ENST00000408101 92 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 GAPDHP73-201ENST00000423411 1007 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 RPL24P8-201ENST00000446071 474 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 AC013429.1-201ENST00000456604 422 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 AC025040.2-201ENST00000558657 1852 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 AC044860.3-201ENST00000559957 368 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 AL109936.2-201ENST00000605350 650 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms