Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PPP1R1AP1-201ENST00000525622 425 ntBASIC6.41□□□□□ -1.38
AP3S2P59780 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC6.41□□□□□ -1.38
AP3S2P59780 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC6.41□□□□□ -1.38
AP3S2P59780 AC233290.2-201ENST00000552852 390 ntBASIC6.41□□□□□ -1.38
AP3S2P59780 PSMA3-AS1-211ENST00000556225 839 ntTSL 4 BASIC6.41□□□□□ -1.38
AP3S2P59780 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.41□□□□□ -1.38
AP3S2P59780 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC6.41□□□□□ -1.38
AP3S2P59780 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC6.41□□□□□ -1.38
AP3S2P59780 RN7SL15P-201ENST00000582825 301 ntBASIC6.41□□□□□ -1.38
AP3S2P59780 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC6.41□□□□□ -1.38
AP3S2P59780 AC012065.3-201ENST00000602736 439 ntBASIC6.41□□□□□ -1.38
AP3S2P59780 CSH1-206ENST00000610991 580 ntTSL 5 BASIC6.41□□□□□ -1.38
AP3S2P59780 AL133351.5-201ENST00000612789 106 ntBASIC6.41□□□□□ -1.38
AP3S2P59780 AC027139.2-201ENST00000615639 448 ntBASIC6.41□□□□□ -1.38
AP3S2P59780 uc_338.24-201ENST00000617802 182 ntBASIC6.41□□□□□ -1.38
AP3S2P59780 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC6.41□□□□□ -1.38
AP3S2P59780 AL355987.5-201ENST00000621585 411 ntBASIC6.41□□□□□ -1.38
AP3S2P59780 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC6.41□□□□□ -1.38
AP3S2P59780 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.41□□□□□ -1.38
AP3S2P59780 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC6.41□□□□□ -1.38
AP3S2P59780 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
AP3S2P59780 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
AP3S2P59780 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AP3S2P59780 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AP3S2P59780 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
AP3S2P59780 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AP3S2P59780 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
AP3S2P59780 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AP3S2P59780 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC6.41□□□□□ -1.38
AP3S2P59780 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AP3S2P59780 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AP3S2P59780 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AP3S2P59780 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.41□□□□□ -1.38
AP3S2P59780 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.41□□□□□ -1.38
AP3S2P59780 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AP3S2P59780 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 AC007993.1-201ENST00000621298 2430 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 ABRAXAS1-208ENST00000515303 1732 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 RN7SKP174-201ENST00000363803 330 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 APH1B-203ENST00000380343 685 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.4□□□□□ -1.38
AP3S2P59780 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
AP3S2P59780 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC6.4□□□□□ -1.38
AP3S2P59780 PHB2P1-201ENST00000434943 890 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 AL022721.1-201ENST00000436521 505 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 DEFT1P-201ENST00000453425 496 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
AP3S2P59780 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.4□□□□□ -1.38
AP3S2P59780 RPL5P12-201ENST00000477071 851 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 CREM-231ENST00000479070 939 ntTSL 5 BASIC6.4□□□□□ -1.38
AP3S2P59780 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.4□□□□□ -1.38
AP3S2P59780 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC6.4□□□□□ -1.38
AP3S2P59780 TRAV33-201ENST00000557514 338 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.4□□□□□ -1.38
AP3S2P59780 AC244034.2-201ENST00000562504 509 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 AC245033.1-201ENST00000562833 880 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
AP3S2P59780 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC6.4□□□□□ -1.38
AP3S2P59780 AC005034.2-201ENST00000604464 414 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 CYCSP1-201ENST00000604815 315 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC6.4□□□□□ -1.38
AP3S2P59780 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC6.4□□□□□ -1.38
AP3S2P59780 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC6.4□□□□□ -1.38
AP3S2P59780 AP003499.3-201ENST00000624680 857 ntBASIC6.4□□□□□ -1.38
AP3S2P59780 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
AP3S2P59780 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
AP3S2P59780 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AP3S2P59780 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
AP3S2P59780 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.4□□□□□ -1.39
AP3S2P59780 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.4□□□□□ -1.39
AP3S2P59780 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
AP3S2P59780 AKR1C4-202ENST00000380448 1414 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
AP3S2P59780 PABPC1P8-201ENST00000452851 2086 ntBASIC6.4□□□□□ -1.39
AP3S2P59780 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
AP3S2P59780 IL15-203ENST00000394159 1545 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
AP3S2P59780 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
AP3S2P59780 CDY10P-201ENST00000452415 1567 ntBASIC6.4□□□□□ -1.39
AP3S2P59780 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
AP3S2P59780 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.39□□□□□ -1.39
AP3S2P59780 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
AP3S2P59780 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
AP3S2P59780 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 Metazoa_SRP.3-201ENST00000366116 282 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 COX17P1-201ENST00000378775 192 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AKR1B1P8-201ENST00000418396 936 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 RBMY2GP-201ENST00000418671 1034 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms