Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 YWHAZP5-201ENST00000419975 730 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 AC134879.1-201ENST00000426062 394 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 PSMD8P1-201ENST00000436275 769 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 PPIAP32-201ENST00000449940 472 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC9.51□□□□□ -0.89
COL15A1P39059 AC008868.1-201ENST00000509786 737 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
COL15A1P39059 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC9.51□□□□□ -0.89
COL15A1P39059 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC9.51□□□□□ -0.89
COL15A1P39059 AL591848.3-201ENST00000570141 2968 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 AC100832.2-201ENST00000582080 776 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 MIR6813-201ENST00000621638 56 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 AC005355.2-201ENST00000625064 484 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 AC079248.1-201ENST00000427568 1546 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC9.51□□□□□ -0.89
COL15A1P39059 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC9.51□□□□□ -0.89
COL15A1P39059 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 ABCF2P1-201ENST00000465687 1867 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 AL161891.1-201ENST00000621575 4636 ntBASIC9.51□□□□□ -0.89
COL15A1P39059 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC9.51□□□□□ -0.89
COL15A1P39059 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
COL15A1P39059 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
COL15A1P39059 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
COL15A1P39059 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC9.5□□□□□ -0.89
COL15A1P39059 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
COL15A1P39059 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC9.5□□□□□ -0.89
COL15A1P39059 AL161626.1-201ENST00000441480 490 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 AC079781.1-201ENST00000441505 394 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC9.5□□□□□ -0.89
COL15A1P39059 CEACAMP11-201ENST00000455211 583 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 YRDCP3-201ENST00000456507 480 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 TFP1-201ENST00000460564 572 ntTSL 4 BASIC9.5□□□□□ -0.89
COL15A1P39059 RN7SL836P-201ENST00000476140 296 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 TFP1-203ENST00000490470 561 ntTSL 4 BASIC9.5□□□□□ -0.89
COL15A1P39059 AC113191.1-201ENST00000517759 403 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 IGKV3D-31-201ENST00000519131 281 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC9.5□□□□□ -0.89
COL15A1P39059 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC9.5□□□□□ -0.89
COL15A1P39059 LYZ-202ENST00000548839 558 ntTSL 2 BASIC9.5□□□□□ -0.89
COL15A1P39059 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
COL15A1P39059 LRRC37A11P-202ENST00000579258 3717 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
COL15A1P39059 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
COL15A1P39059 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC9.5□□□□□ -0.89
COL15A1P39059 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC9.5□□□□□ -0.89
COL15A1P39059 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
COL15A1P39059 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
COL15A1P39059 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
COL15A1P39059 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
COL15A1P39059 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
COL15A1P39059 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC9.5□□□□□ -0.89
COL15A1P39059 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 AL390840.1-201ENST00000420303 988 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC9.5□□□□□ -0.89
COL15A1P39059 AC063955.1-201ENST00000462872 685 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC9.5□□□□□ -0.89
COL15A1P39059 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC9.5□□□□□ -0.89
COL15A1P39059 SCARNA11.1-201ENST00000516918 132 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 AL356019.2-201ENST00000556738 3829 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 NIFKP4-201ENST00000567275 1192 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 AL023806.2-201ENST00000603042 263 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 COX6CP16-201ENST00000603667 216 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms