Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 PHF2P2-202ENST00000444553 2865 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 RNA5SP149-201ENST00000364952 92 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AL109918.1-202ENST00000406724 436 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 OR5M13P-201ENST00000433944 937 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 RPS13P2-201ENST00000437890 455 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC114300.1-201ENST00000502347 280 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 RNU6-964P-201ENST00000516524 69 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC084251.1-201ENST00000521867 382 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 IGKV1OR1-1-201ENST00000613775 347 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC243830.3-201ENST00000616810 376 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AL353608.4-201ENST00000624487 1188 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 RPL36AP21-202ENST00000639134 430 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 AC010886.1-201ENST00000437380 2869 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 TMEM75-201ENST00000624314 2165 ntBASIC5.52□□□□□ -1.53
LYRM9A8MSI8 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC5.52□□□□□ -1.53
LYRM9A8MSI8 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 AL022163.1-201ENST00000430261 1569 ntBASIC5.51□□□□□ -1.53
LYRM9A8MSI8 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 RNA5SP389-201ENST00000362610 115 ntBASIC5.51□□□□□ -1.53
LYRM9A8MSI8 RNA5SP226-201ENST00000362653 115 ntBASIC5.51□□□□□ -1.53
LYRM9A8MSI8 RNA5SP161-201ENST00000363871 115 ntBASIC5.51□□□□□ -1.53
LYRM9A8MSI8 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 TERF1P4-201ENST00000399580 1115 ntBASIC5.51□□□□□ -1.53
LYRM9A8MSI8 LARP1P1-201ENST00000407692 292 ntBASIC5.51□□□□□ -1.53
LYRM9A8MSI8 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.51□□□□□ -1.53
LYRM9A8MSI8 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms