Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RN7SKP105-201ENST00000517192 314 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 COX4I1P1-201ENST00000554239 509 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AL390058.1-201ENST00000603834 629 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 RPS28P1-201ENST00000604589 187 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 BX005040.2-201ENST00000620504 370 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AC009163.7-201ENST00000621929 2557 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC087045.3-201ENST00000623046 2468 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 TATDN2P1-201ENST00000443767 2331 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 GTF2IP1-202ENST00000614592 2047 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 MIR555-201ENST00000384987 96 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC231533.2-201ENST00000419045 978 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 TAS2R2P-201ENST00000421146 910 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 CLIC4P3-201ENST00000422221 752 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AL954705.1-201ENST00000435277 559 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AL031736.1-201ENST00000449688 618 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 RN7SL182P-201ENST00000496499 300 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 SUMO2P17-201ENST00000504438 285 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC012181.2-201ENST00000570210 699 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC007204.1-201ENST00000621794 555 ntBASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 DLST-216ENST00000626051 252 ntTSL 5 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
HMG20BQ9P0W2 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 FOLH1B-202ENST00000529567 2145 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 ZNF710-AS1-202ENST00000620791 2133 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AL355375.1-201ENST00000405686 392 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AL590240.2-201ENST00000413370 894 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 VN1R35P-201ENST00000428102 693 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AC092421.1-201ENST00000448148 418 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AC013429.1-201ENST00000456604 422 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AC016489.1-201ENST00000461109 375 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AL031429.2-201ENST00000602605 649 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 ANKRD20A19P-203ENST00000602724 295 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AL096855.2-201ENST00000605785 369 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AC026367.2-201ENST00000610630 553 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AC106872.6-201ENST00000514228 1346 ntBASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms