Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HIST1H2BPS2-201ENST00000402707 340 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 OR10U1P-201ENST00000414690 905 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 AC004986.1-201ENST00000414855 607 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.95□□□□□ -1.14
SLC1A1P43005 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC7.95□□□□□ -1.14
SLC1A1P43005 EIF3IP1-201ENST00000433048 967 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 AC231532.1-201ENST00000438584 312 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AL590648.1-201ENST00000456479 460 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.95□□□□□ -1.14
SLC1A1P43005 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AC026111.1-201ENST00000551090 1195 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC7.95□□□□□ -1.14
SLC1A1P43005 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC7.95□□□□□ -1.14
SLC1A1P43005 MIR3137-201ENST00000577367 75 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 AL391903.2-201ENST00000614532 247 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 AL132821.1-201ENST00000616029 394 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC7.95□□□□□ -1.14
SLC1A1P43005 AC116631.1-202ENST00000640984 683 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SLC1A1P43005 UGT2B25P-201ENST00000511504 1586 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
SLC1A1P43005 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SLC1A1P43005 NF1P8-201ENST00000415351 1461 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
SLC1A1P43005 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SLC1A1P43005 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SLC1A1P43005 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.94□□□□□ -1.14
SLC1A1P43005 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 RPL5P4-201ENST00000434805 886 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC7.94□□□□□ -1.14
SLC1A1P43005 BSNDP4-201ENST00000436076 388 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 FO393419.1-201ENST00000443746 355 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 AC114928.1-201ENST00000446516 415 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC7.94□□□□□ -1.14
SLC1A1P43005 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.94□□□□□ -1.14
SLC1A1P43005 SSX8-201ENST00000506270 579 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 AP004833.1-201ENST00000507987 1238 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 GCSHP1-201ENST00000512554 484 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.94□□□□□ -1.14
SLC1A1P43005 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC7.94□□□□□ -1.14
SLC1A1P43005 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC7.94□□□□□ -1.14
SLC1A1P43005 AC013283.1-201ENST00000557282 492 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 AL137802.2-201ENST00000562878 1110 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 AC074051.4-201ENST00000564888 892 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC7.94□□□□□ -1.14
SLC1A1P43005 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC7.94□□□□□ -1.14
SLC1A1P43005 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC7.94□□□□□ -1.14
SLC1A1P43005 AL731533.2-201ENST00000607898 578 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 AC012488.1-201ENST00000611221 640 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SLC1A1P43005 AC007224.2-201ENST00000625011 510 ntBASIC7.94□□□□□ -1.14
SLC1A1P43005 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
SLC1A1P43005 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
SLC1A1P43005 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
SLC1A1P43005 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
SLC1A1P43005 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.94□□□□□ -1.14
SLC1A1P43005 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms