Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
UBE4BO95155 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.34□□□□□ -1.08
UBE4BO95155 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
UBE4BO95155 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC8.33□□□□□ -1.08
UBE4BO95155 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.33□□□□□ -1.08
UBE4BO95155 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 RNA5SP18-201ENST00000390935 121 ntBASIC8.33□□□□□ -1.08
UBE4BO95155 PCNAP3-201ENST00000397222 778 ntBASIC8.33□□□□□ -1.08
UBE4BO95155 GNAI2P2-201ENST00000417003 916 ntBASIC8.33□□□□□ -1.08
UBE4BO95155 RPL5P6-201ENST00000425640 886 ntBASIC8.33□□□□□ -1.08
UBE4BO95155 DNAJA1P6-201ENST00000437347 354 ntBASIC8.33□□□□□ -1.08
UBE4BO95155 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.33□□□□□ -1.08
UBE4BO95155 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.33□□□□□ -1.08
UBE4BO95155 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC8.33□□□□□ -1.08
UBE4BO95155 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
UBE4BO95155 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.33□□□□□ -1.08
UBE4BO95155 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.33□□□□□ -1.08
UBE4BO95155 RN7SL680P-201ENST00000620379 299 ntBASIC8.33□□□□□ -1.08
UBE4BO95155 AC005383.1-201ENST00000622689 534 ntBASIC8.33□□□□□ -1.08
UBE4BO95155 AC129908.1-201ENST00000624553 648 ntBASIC8.33□□□□□ -1.08
UBE4BO95155 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 AC087045.3-201ENST00000623046 2468 ntBASIC8.33□□□□□ -1.08
UBE4BO95155 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.33□□□□□ -1.08
UBE4BO95155 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.33□□□□□ -1.08
UBE4BO95155 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.33□□□□□ -1.08
UBE4BO95155 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
UBE4BO95155 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.33□□□□□ -1.08
UBE4BO95155 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.33□□□□□ -1.08
UBE4BO95155 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.33□□□□□ -1.08
UBE4BO95155 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.33□□□□□ -1.08
UBE4BO95155 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.33□□□□□ -1.08
UBE4BO95155 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC8.33□□□□□ -1.08
UBE4BO95155 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
UBE4BO95155 OR51A10P-201ENST00000307165 937 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 MIR575-201ENST00000385013 94 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 AC004986.1-201ENST00000414855 607 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 RPSAP59-201ENST00000421048 890 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC8.32□□□□□ -1.08
UBE4BO95155 FTH1P20-201ENST00000434913 548 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 AC007790.1-201ENST00000439081 782 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
UBE4BO95155 MRPS21P1-201ENST00000453850 223 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
UBE4BO95155 NPY6R-201ENST00000503807 1112 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 ADI1P2-201ENST00000514945 429 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.32□□□□□ -1.08
UBE4BO95155 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC8.32□□□□□ -1.08
UBE4BO95155 SNX18P27-201ENST00000523611 779 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC8.32□□□□□ -1.08
UBE4BO95155 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
UBE4BO95155 APEX1-214ENST00000557054 888 ntTSL 5 BASIC8.32□□□□□ -1.08
UBE4BO95155 ULK4P2-202ENST00000564187 492 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 AC136944.5-201ENST00000573021 151 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
UBE4BO95155 AP003068.4-201ENST00000623192 802 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.32□□□□□ -1.08
UBE4BO95155 HSPA8P11-201ENST00000508840 1898 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 AC245505.2-201ENST00000553572 3055 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.32□□□□□ -1.08
UBE4BO95155 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
UBE4BO95155 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
UBE4BO95155 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.32□□□□□ -1.08
UBE4BO95155 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
UBE4BO95155 MAPK10-354ENST00000641823 2732 ntBASIC8.32□□□□□ -1.08
UBE4BO95155 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
UBE4BO95155 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
UBE4BO95155 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
UBE4BO95155 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.32□□□□□ -1.08
UBE4BO95155 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
UBE4BO95155 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
UBE4BO95155 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.31□□□□□ -1.08
UBE4BO95155 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.31□□□□□ -1.08
UBE4BO95155 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 MIR498-201ENST00000385134 124 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC8.31□□□□□ -1.08
UBE4BO95155 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC8.31□□□□□ -1.08
UBE4BO95155 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC8.31□□□□□ -1.08
UBE4BO95155 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC8.31□□□□□ -1.08
UBE4BO95155 RHEBP1-201ENST00000448647 556 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.31□□□□□ -1.08
UBE4BO95155 AC096922.1-201ENST00000461635 651 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 RN7SL233P-201ENST00000469988 277 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 AC026700.1-201ENST00000512074 544 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 GCSHP1-201ENST00000512554 484 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms