Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.07□□□□□ -1.28
C9orf40Q8IXQ3 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
C9orf40Q8IXQ3 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.07□□□□□ -1.28
C9orf40Q8IXQ3 MAPK10-354ENST00000641823 2732 ntBASIC7.07□□□□□ -1.28
C9orf40Q8IXQ3 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC126773.4-201ENST00000612545 3043 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AP001527.1-201ENST00000566440 1957 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 RNA5SP448-201ENST00000363151 111 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC004986.1-201ENST00000414855 607 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC109638.1-201ENST00000417406 326 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 PGAM1P3-201ENST00000420790 565 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 GAPDHP46-201ENST00000424043 994 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 VN1R35P-201ENST00000428102 693 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC106774.2-201ENST00000510266 406 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC007262.1-201ENST00000604099 321 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC135050.6-202ENST00000613584 392 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AL353898.2-201ENST00000623000 255 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC129908.1-201ENST00000624553 648 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AC110769.3-201ENST00000624567 1173 ntBASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
C9orf40Q8IXQ3 AL161891.1-201ENST00000621575 4636 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 PSMC1P7-201ENST00000495689 1315 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC026464.2-201ENST00000567834 2421 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AL954705.1-201ENST00000435277 559 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 RPL7P14-201ENST00000449851 741 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms