Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AP000436.1-201ENST00000605239 800 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 AL391903.2-201ENST00000614532 247 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 AC119674.1-201ENST00000641611 1210 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
UBE4BO95155 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 RERE-203ENST00000400907 2973 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
UBE4BO95155 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
UBE4BO95155 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
UBE4BO95155 AC138207.6-201ENST00000579164 1967 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
UBE4BO95155 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
UBE4BO95155 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC8.37□□□□□ -1.07
UBE4BO95155 SNORD46-201ENST00000364043 104 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 AC130472.1-201ENST00000427885 309 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC8.37□□□□□ -1.07
UBE4BO95155 AC107956.2-201ENST00000496042 454 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
UBE4BO95155 AC108120.1-201ENST00000506543 991 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC8.37□□□□□ -1.07
UBE4BO95155 MIR3689C-201ENST00000581239 72 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 AC005495.1-201ENST00000586611 1211 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC8.37□□□□□ -1.07
UBE4BO95155 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC8.37□□□□□ -1.07
UBE4BO95155 AC022239.4-201ENST00000602626 504 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 AL669830.1-201ENST00000621457 656 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.37□□□□□ -1.07
UBE4BO95155 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
UBE4BO95155 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.37□□□□□ -1.07
UBE4BO95155 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.37□□□□□ -1.07
UBE4BO95155 AL353795.1-201ENST00000439134 1775 ntBASIC8.37□□□□□ -1.07
UBE4BO95155 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.37□□□□□ -1.07
UBE4BO95155 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.37□□□□□ -1.07
UBE4BO95155 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
UBE4BO95155 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
UBE4BO95155 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
UBE4BO95155 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC8.36□□□□□ -1.07
UBE4BO95155 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
UBE4BO95155 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.36□□□□□ -1.07
UBE4BO95155 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
UBE4BO95155 AL139327.1-201ENST00000382988 348 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.36□□□□□ -1.07
UBE4BO95155 RAC1P4-201ENST00000419413 579 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
UBE4BO95155 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.36□□□□□ -1.07
UBE4BO95155 RN7SL332P-201ENST00000482163 254 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC8.36□□□□□ -1.07
UBE4BO95155 AP004833.1-201ENST00000507987 1238 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 AC114801.1-201ENST00000512633 297 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.36□□□□□ -1.07
UBE4BO95155 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
UBE4BO95155 AC116165.3-201ENST00000614524 400 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 AC099667.1-201ENST00000624222 469 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC8.36□□□□□ -1.07
UBE4BO95155 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.36□□□□□ -1.07
UBE4BO95155 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 AC074198.1-201ENST00000506546 1397 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 AC090132.1-201ENST00000524071 1480 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 MAPK10-281ENST00000641170 3070 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 AC011008.2-201ENST00000624866 3352 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms