Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 AC016405.3-201ENST00000607710 860 ntBASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 AC013268.1-206ENST00000638368 961 ntBASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 AC112229.1-201ENST00000639295 961 ntBASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 AL020996.1-203ENST00000536896 2307 ntBASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 AL162377.1-201ENST00000618844 1793 ntBASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
DDX49Q9Y6V7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX49Q9Y6V7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 SLC7A5P1-201ENST00000568957 537 ntBASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
DDX49Q9Y6V7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX49Q9Y6V7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 AC099778.1-201ENST00000568593 1911 ntBASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms