Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 TERF1P5-201ENST00000477545 1207 ntBASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 AC104771.1-201ENST00000603335 964 ntBASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB3Q9Y5G1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 MIR663A-201ENST00000385250 93 ntBASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 GPX1P1-201ENST00000388829 606 ntBASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 FAM21FP-204ENST00000608637 956 ntBASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 AC010536.3-201ENST00000620306 533 ntBASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 AIRN-201ENST00000601203 4374 ntBASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB3Q9Y5G1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 AL591742.1-201ENST00000604433 565 ntBASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 AL109923.1-201ENST00000618799 583 ntBASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB3Q9Y5G1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 AL162412.1-201ENST00000567129 965 ntBASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 AL121832.2-201ENST00000610979 668 ntBASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 MIR2861-201ENST00000636310 90 ntBASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 AC013268.1-206ENST00000638368 961 ntBASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 AC112229.1-201ENST00000639295 961 ntBASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGB3Q9Y5G1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB3Q9Y5G1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB3Q9Y5G1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB3Q9Y5G1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB3Q9Y5G1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms