Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDHB1Q9Y5F3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB1Q9Y5F3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 AL355472.2-201ENST00000422958 438 ntBASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB1Q9Y5F3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 KRT17P1-201ENST00000399211 1546 ntBASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB1Q9Y5F3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms