Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF6Q9Y252 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 FP700111.2-201ENST00000619190 1892 ntBASIC18.89■□□□□ 0.61
RNF6Q9Y252 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF6Q9Y252 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF6Q9Y252 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF6Q9Y252 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF6Q9Y252 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF6Q9Y252 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF6Q9Y252 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF6Q9Y252 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF6Q9Y252 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF6Q9Y252 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RNF6Q9Y252 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF6Q9Y252 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF6Q9Y252 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF6Q9Y252 AC013268.1-206ENST00000638368 961 ntBASIC18.88■□□□□ 0.61
RNF6Q9Y252 AC112229.1-201ENST00000639295 961 ntBASIC18.88■□□□□ 0.61
RNF6Q9Y252 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF6Q9Y252 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF6Q9Y252 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF6Q9Y252 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF6Q9Y252 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF6Q9Y252 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF6Q9Y252 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF6Q9Y252 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 TERF1P5-201ENST00000477545 1207 ntBASIC18.87■□□□□ 0.61
RNF6Q9Y252 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF6Q9Y252 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 EEF1DP3-203ENST00000566025 782 ntBASIC18.87■□□□□ 0.61
RNF6Q9Y252 SLC7A5P1-201ENST00000568957 537 ntBASIC18.87■□□□□ 0.61
RNF6Q9Y252 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF6Q9Y252 MIR4651-201ENST00000582622 73 ntBASIC18.87■□□□□ 0.61
RNF6Q9Y252 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF6Q9Y252 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF6Q9Y252 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF6Q9Y252 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
RNF6Q9Y252 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF6Q9Y252 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 AC073210.2-201ENST00000430369 194 ntBASIC18.86■□□□□ 0.61
RNF6Q9Y252 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.86■□□□□ 0.61
RNF6Q9Y252 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF6Q9Y252 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF6Q9Y252 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF6Q9Y252 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF6Q9Y252 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF6Q9Y252 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF6Q9Y252 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF6Q9Y252 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF6Q9Y252 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF6Q9Y252 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms