Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 LINC01006-201ENST00000333319 2292 ntBASIC23.09■■□□□ 1.29
DDX41Q9UJV9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 AC244015.2-201ENST00000616358 1861 ntBASIC23.09■■□□□ 1.29
DDX41Q9UJV9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX41Q9UJV9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.08■■□□□ 1.29
DDX41Q9UJV9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 AP006294.2-201ENST00000641667 209 ntBASIC23.08■■□□□ 1.29
DDX41Q9UJV9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX41Q9UJV9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC23.08■■□□□ 1.28
DDX41Q9UJV9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX41Q9UJV9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.28
DDX41Q9UJV9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.08■■□□□ 1.28
DDX41Q9UJV9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX41Q9UJV9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.08■■□□□ 1.28
DDX41Q9UJV9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
DDX41Q9UJV9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX41Q9UJV9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX41Q9UJV9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX41Q9UJV9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 SOX15-203ENST00000570788 1093 ntBASIC23.06■■□□□ 1.28
DDX41Q9UJV9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX41Q9UJV9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms