Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VTI1BQ9UEU0 AC087289.5-201ENST00000586076 3175 ntBASIC19.75■□□□□ 0.75
VTI1BQ9UEU0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
VTI1BQ9UEU0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTI1BQ9UEU0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTI1BQ9UEU0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VTI1BQ9UEU0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTI1BQ9UEU0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTI1BQ9UEU0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 KRT18P20-201ENST00000548986 1279 ntBASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTI1BQ9UEU0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 AL158211.5-201ENST00000623583 2518 ntBASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
VTI1BQ9UEU0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 AC137761.2-201ENST00000561729 223 ntBASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 AC145350.3-201ENST00000569033 163 ntBASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTI1BQ9UEU0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTI1BQ9UEU0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 KRT8P36-201ENST00000489121 1440 ntBASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 AC006015.1-201ENST00000429970 570 ntBASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 KRT18P11-201ENST00000435214 1283 ntBASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.7■□□□□ 0.74
VTI1BQ9UEU0 AC092666.2-201ENST00000613287 246 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms