Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 DUSP5P2-201ENST00000426873 1033 ntBASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 MYC-209ENST00000641252 345 ntBASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PPARGC1AQ9UBK2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 AC098934.4-201ENST00000564127 592 ntBASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPARGC1AQ9UBK2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 C2orf69P4-201ENST00000565394 541 ntBASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPARGC1AQ9UBK2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPARGC1AQ9UBK2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPARGC1AQ9UBK2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 AC097658.1-201ENST00000475555 843 ntBASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPARGC1AQ9UBK2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 FEM1AP1-201ENST00000431297 1995 ntBASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.88■□□□□ 0.93
PPARGC1AQ9UBK2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms