Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 SLC7A5P1-201ENST00000568957 537 ntBASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 AL137784.2-201ENST00000607332 1000 ntBASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 AC116050.2-201ENST00000612102 1779 ntBASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 UBE2DNL-204ENST00000602536 740 ntBASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 MIR2861-201ENST00000636310 90 ntBASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 HCG11-201ENST00000411553 5696 ntBASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIN7CQ9NUP9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 AC092666.2-201ENST00000613287 246 ntBASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 MYCNOS-205ENST00000641950 531 ntBASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN7CQ9NUP9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms