Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 TMEM179-206ENST00000616017 1645 ntBASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCM2LQ9NUG4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCM2LQ9NUG4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCM2LQ9NUG4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCM2LQ9NUG4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.08■□□□□ 0.64
CCM2LQ9NUG4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 CDCA4P2-201ENST00000441182 718 ntBASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 AC137761.2-201ENST00000561729 223 ntBASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 AC145350.3-201ENST00000569033 163 ntBASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 AC073111.5-205ENST00000641717 521 ntBASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2LQ9NUG4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 AC093484.2-201ENST00000580996 2166 ntBASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 AC005224.4-201ENST00000583262 1652 ntBASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 AC006015.1-201ENST00000429970 570 ntBASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 RAP2CP1-201ENST00000605103 478 ntBASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2LQ9NUG4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms