Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 RNA5SP413-201ENST00000516373 109 ntBASIC19■□□□□ 0.63
PRDM9Q9NQV7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 HLA-B-256ENST00000639848 1089 ntBASIC19■□□□□ 0.63
PRDM9Q9NQV7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 AL157384.1-201ENST00000445995 2473 ntBASIC19■□□□□ 0.63
PRDM9Q9NQV7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRDM9Q9NQV7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19■□□□□ 0.63
PRDM9Q9NQV7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.99■□□□□ 0.63
PRDM9Q9NQV7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 DPP3P2-201ENST00000416030 1696 ntBASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 AL512408.1-201ENST00000569378 2000 ntBASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 AC023632.3-201ENST00000521633 145 ntBASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 AC060766.5-201ENST00000590539 871 ntBASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 PTBP1P-201ENST00000554374 1601 ntBASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.98■□□□□ 0.63
PRDM9Q9NQV7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PRDM9Q9NQV7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms