Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 MCRIP2P1-201ENST00000394346 511 ntBASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEUROD4Q9HD90 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 CNN2P6-201ENST00000439038 900 ntBASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 AC080038.1-201ENST00000611274 1154 ntBASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 BID-214ENST00000617586 542 ntTSL 5 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEUROD4Q9HD90 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 DUX4L16-201ENST00000555130 1264 ntBASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 AC011767.1-201ENST00000617410 1153 ntBASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
NEUROD4Q9HD90 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 BX119927.1-201ENST00000636596 1552 ntBASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 AC068338.2-201ENST00000563278 1430 ntBASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 AC069236.1-201ENST00000604339 616 ntBASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.94■□□□□ 0.62
NEUROD4Q9HD90 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms