Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 FSCN1P1-201ENST00000568912 1481 ntBASIC18.91■□□□□ 0.62
CHD8Q9HCK8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 HOMER2P1-201ENST00000455653 964 ntBASIC18.9■□□□□ 0.62
CHD8Q9HCK8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 AL355385.1-201ENST00000606123 409 ntBASIC18.9■□□□□ 0.62
CHD8Q9HCK8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 AC117500.6-201ENST00000624871 588 ntBASIC18.9■□□□□ 0.62
CHD8Q9HCK8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.9■□□□□ 0.62
CHD8Q9HCK8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 AC083849.1-201ENST00000615227 514 ntBASIC18.9■□□□□ 0.62
CHD8Q9HCK8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 AC116050.2-201ENST00000612102 1779 ntBASIC18.9■□□□□ 0.62
CHD8Q9HCK8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD8Q9HCK8 AC092068.2-201ENST00000590491 1708 ntBASIC18.9■□□□□ 0.62
CHD8Q9HCK8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD8Q9HCK8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.89■□□□□ 0.62
CHD8Q9HCK8 KRT18P13-201ENST00000400056 1290 ntBASIC18.89■□□□□ 0.62
CHD8Q9HCK8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHD8Q9HCK8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHD8Q9HCK8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.89■□□□□ 0.62
CHD8Q9HCK8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.89■□□□□ 0.62
CHD8Q9HCK8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHD8Q9HCK8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD8Q9HCK8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CHD8Q9HCK8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD8Q9HCK8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHD8Q9HCK8 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.89■□□□□ 0.61
CHD8Q9HCK8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CHD8Q9HCK8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CHD8Q9HCK8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHD8Q9HCK8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.88■□□□□ 0.61
CHD8Q9HCK8 AC007663.1-201ENST00000438948 1240 ntBASIC18.88■□□□□ 0.61
CHD8Q9HCK8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 AC104692.2-201ENST00000603054 253 ntBASIC18.88■□□□□ 0.61
CHD8Q9HCK8 NPAP1P7-201ENST00000613027 823 ntBASIC18.88■□□□□ 0.61
CHD8Q9HCK8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.88■□□□□ 0.61
CHD8Q9HCK8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 AC142381.3-201ENST00000568208 1670 ntBASIC18.87■□□□□ 0.61
CHD8Q9HCK8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 PMS2P1-201ENST00000431037 1228 ntBASIC18.87■□□□□ 0.61
CHD8Q9HCK8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms