Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 AL512408.1-201ENST00000569378 2000 ntBASIC18.64■□□□□ 0.57
UBQLN3Q9H347 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 AL121603.2-201ENST00000557373 2117 ntBASIC18.64■□□□□ 0.57
UBQLN3Q9H347 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 CD99P1-205ENST00000527459 561 ntBASIC18.63■□□□□ 0.57
UBQLN3Q9H347 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 AL589743.5-201ENST00000616611 1050 ntBASIC18.63■□□□□ 0.57
UBQLN3Q9H347 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN3Q9H347 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 AC097658.1-201ENST00000475555 843 ntBASIC18.62■□□□□ 0.57
UBQLN3Q9H347 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN3Q9H347 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.61■□□□□ 0.57
UBQLN3Q9H347 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBQLN3Q9H347 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 AFG3L1P-217ENST00000557444 2447 ntBASIC18.6■□□□□ 0.57
UBQLN3Q9H347 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 AC087633.2-202ENST00000565166 1439 ntBASIC18.6■□□□□ 0.57
UBQLN3Q9H347 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.6■□□□□ 0.57
UBQLN3Q9H347 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN3Q9H347 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms