Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 AC133681.1-201ENST00000465482 601 ntBASIC20.91■□□□□ 0.94
RNF38Q9H0F5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 AC007375.3-201ENST00000600936 2314 ntBASIC20.9■□□□□ 0.94
RNF38Q9H0F5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 AC007225.1-201ENST00000566331 1836 ntBASIC20.9■□□□□ 0.94
RNF38Q9H0F5 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF38Q9H0F5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF38Q9H0F5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF38Q9H0F5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF38Q9H0F5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF38Q9H0F5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF38Q9H0F5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF38Q9H0F5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF38Q9H0F5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF38Q9H0F5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 KRASP1-201ENST00000407852 552 ntBASIC20.88■□□□□ 0.93
RNF38Q9H0F5 AC239809.2-201ENST00000415381 517 ntBASIC20.88■□□□□ 0.93
RNF38Q9H0F5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF38Q9H0F5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF38Q9H0F5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 AC110285.5-201ENST00000611501 352 ntBASIC20.86■□□□□ 0.93
RNF38Q9H0F5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF38Q9H0F5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms