Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM2Q9C040 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 AC026185.1-201ENST00000445748 174 ntBASIC18.48■□□□□ 0.55
TRIM2Q9C040 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 AC016405.3-201ENST00000607710 860 ntBASIC18.48■□□□□ 0.55
TRIM2Q9C040 AC011767.1-201ENST00000617410 1153 ntBASIC18.48■□□□□ 0.55
TRIM2Q9C040 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM2Q9C040 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM2Q9C040 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM2Q9C040 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM2Q9C040 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM2Q9C040 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM2Q9C040 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM2Q9C040 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 DUX4L16-201ENST00000555130 1264 ntBASIC18.47■□□□□ 0.55
TRIM2Q9C040 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM2Q9C040 AC100791.3-201ENST00000617619 330 ntBASIC18.47■□□□□ 0.55
TRIM2Q9C040 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM2Q9C040 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM2Q9C040 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRIM2Q9C040 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM2Q9C040 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM2Q9C040 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM2Q9C040 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM2Q9C040 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM2Q9C040 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM2Q9C040 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM2Q9C040 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM2Q9C040 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 HLA-L-209ENST00000420110 1011 ntBASIC18.46■□□□□ 0.55
TRIM2Q9C040 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 RARRES2P4-201ENST00000514074 484 ntBASIC18.46■□□□□ 0.55
TRIM2Q9C040 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM2Q9C040 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM2Q9C040 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM2Q9C040 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM2Q9C040 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
TRIM2Q9C040 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM2Q9C040 AC112907.3-201ENST00000577781 2400 ntBASIC18.45■□□□□ 0.54
TRIM2Q9C040 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM2Q9C040 TCF3P1-201ENST00000423021 1937 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms