Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 NPAP1P7-201ENST00000613027 823 ntBASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN3Q9BTN0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 KRT18P38-201ENST00000449496 1282 ntBASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 AL441883.1-201ENST00000566170 1045 ntBASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 AC140113.3-201ENST00000605663 199 ntBASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.27■□□□□ 0.84
LRFN3Q9BTN0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.27■□□□□ 0.83
LRFN3Q9BTN0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRFN3Q9BTN0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 CCR12P-201ENST00000446203 998 ntBASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LRFN3Q9BTN0 AC138932.3-201ENST00000567634 1902 ntBASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 AC137767.1-201ENST00000602918 1920 ntBASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 AL671883.3-201ENST00000603274 991 ntBASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 AC010653.2-201ENST00000623505 997 ntBASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN3Q9BTN0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN3Q9BTN0 AC004812.2-201ENST00000611079 2094 ntBASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 ZNF444P1-201ENST00000559497 298 ntBASIC20.23■□□□□ 0.83
LRFN3Q9BTN0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms