Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 KRT18P20-201ENST00000548986 1279 ntBASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 AC243732.1-201ENST00000612648 864 ntBASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 BX119927.1-201ENST00000636596 1552 ntBASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HDHD3Q9BSH5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.96■□□□□ 0.3
HDHD3Q9BSH5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HDHD3Q9BSH5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HDHD3Q9BSH5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HDHD3Q9BSH5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
HDHD3Q9BSH5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.96■□□□□ 0.3
HDHD3Q9BSH5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HDHD3Q9BSH5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 AC123595.1-201ENST00000440769 1046 ntBASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 AC019069.1-201ENST00000610008 1333 ntBASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HDHD3Q9BSH5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 YBX1P1-201ENST00000445822 960 ntBASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 KRT18P14-201ENST00000534205 1250 ntBASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HDHD3Q9BSH5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 FAM21FP-204ENST00000608637 956 ntBASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 AC098818.2-201ENST00000564925 2320 ntBASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDHD3Q9BSH5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms