Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
NUDCD1Q96RS6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 MKRN4P-201ENST00000444706 1521 ntBASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 MIR2861-201ENST00000636310 90 ntBASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD1Q96RS6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 AC087633.2-202ENST00000565166 1439 ntBASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 GUSBP6-202ENST00000438529 1198 ntBASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 TSPY6P-201ENST00000448518 926 ntBASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 CYP2T3P-201ENST00000601990 817 ntBASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD1Q96RS6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 PGM5P4-201ENST00000421970 445 ntBASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms